| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8734 |
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| Symbol | |
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| ID | 8340126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 10127361 |
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| End bp | 10127894 |
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| Gene Length | 534 bp |
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| Protein Length | 177 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644961825 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003119390 |
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| Protein GI | 256397826 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02983] RNA polymerase sigma-70 factor, sigma-E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.417481 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.226807 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGGAAAC TCAAGAGCCC GCTGGCGCAT GGCGGTTCGG CCGAGGCCCG CGAACAGTTC
CGCGAGTACG CCGTGGGGGC ACAGCCCCAC TTGCGCCGTA GCGCGTACCT GTTGTGCGGG
AACTGGCACA CCGCCGAGGA TCTCGTGCAG ACGACCTTCG GTCGGCTGTT CCGGTCCTGG
CCGAGGGTGA TGCGCGCCGA CTCCGTCGAC GCCTACGCCC GCACGGTGCT GTATCGCGCC
TTCCTGGACA TGAAGCAGAA GGACCGTGCG ACGGTCGCCC TCGACAACGT CCCCGAACCG
GCCTCCCCTT CTGACGACGC CGCACTCCGG CTCGCGGTGC GCAGCGCACT CGACACGCTG
CCGCCGCGCG CCAGGGCGGT CGTCGTCCTG CGGTTCTGGG AGGACCTGAC CGTCGACCAG
ACAGCCGACG CACTGGGGAT CACGCCGGGG ACGGTCAAGA GCCAGACGTC GCGGGCGATC
GCCATCCTGC GGCAACGGCT CGGTGCGGCC GTCAGCGAGC TCATCCACGA CTAG
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| Protein sequence | MRKLKSPLAH GGSAEAREQF REYAVGAQPH LRRSAYLLCG NWHTAEDLVQ TTFGRLFRSW
PRVMRADSVD AYARTVLYRA FLDMKQKDRA TVALDNVPEP ASPSDDAALR LAVRSALDTL
PPRARAVVVL RFWEDLTVDQ TADALGITPG TVKSQTSRAI AILRQRLGAA VSELIHD
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