| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8572 |
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| Symbol | |
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| ID | 8339954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 9942019 |
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| End bp | 9943542 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644961657 |
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| Product | DNA binding domain protein, excisionase family |
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| Protein accession | YP_003119232 |
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| Protein GI | 256397668 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR01764] DNA binding domain, excisionase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0167813 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0589685 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGACT GCTCACCCTT TTCGCATGGC CCAGAGCGGG GGCTGCTGTC CATCAAGGAA
GCTGCCGCCG CGCTCGGTGT TTCGCAGAGC ACGATGTACA AGCTGATCAA GGAGGAGAAG
GTTCAGGTCG ATCGGAGCGA AGGCCAGACC CGGGTGCCGT CCTGGGCGAT CGACGAGTAC
ATGGCCAACC CCGATCGCTC CAAGAGAGCG AAGCGACGAA GCCCTTCTTC ACGTCGGAAC
CGGCCCGACG GTACCCGCGC TCCGAACGGC GAGTCCTCGA TCTACTTCAG CGACAGCGAC
AAGCTGTGGC ATGCGTGGGT GACGGTCGGC GTGAAGGACG ATGGCAGTCC TGATCGGCGG
CATCGGAAGT GCAAGGACGA GAAGGCACTC CGTCGCCGGG TCAACGAACT GGTGCAAGCG
CGGGATGCTG GACACGTCGC CAAAGCGGGG TCATCGCTGG TCACTGTGGA GCAGTGGCTT
ACGCACTGGG TCGAGAACAT CGCGGCACTG AAGGTCCGGC CCAGCACGCT CGCCAGCTAC
CGAGTGGCCG TGTTCCACCA CCTCGTCCCG AACATCGGCA GGCATCGCCT GGAGAAGATC
GAGCCGGAGC ACTTCGAAGC GTTGTATCGG AAGATGCTTG AGGCGGCCTC CAAGCCAGCG
ACCGTCCATC AGGTGCACCG CACGGCACGT ACAGCTTTCG GCGTGGCGTA CACGCGGAGG
CTGATCCCCA AGAACCCGGT AGCGTTCGCG ACACCGCCGA CGGTGGAAGA GATCGAGATC
GACCCCTACA CCGTTGAGGA GGTCGAGCGG ATCCTCGTGA CGGCGCTCAA GAGGCGAAAC
GGCTTCCGGT GGGTGTTGGC CCTGGTCTTC GGATTTCGTC AAGGCGAGGC TCTGGGCTTT
CAGTGGTCCG ACTTCAGGAT CGACGACGAG GACACCGGTA ACGAGACGAT CTACGTCCGA
AGGAACCGCT TGCGACCGAA GTACTCCCAC GGCTGTTCCG ACCCGTGTGC GAGGAAGTGG
CCAGGTCTTT GCCCGCAACG GGTCGAGCTG TTGCCGAAGA CCGGCTCGGT GAAGTCGAAG
GCTGCCGAGC GCCCGTTTCC GGTTCCCCGA CCGATTGTCT TCCTGGCGCG TGTGCATCGC
GAGGCGCAGA GGCAAGAACG TCTGGCTGCG GGGCCGCAGT GGGTCGACGG AGGCTGGGTC
ATCGCGACCG AGACTGGCGA GGCTGTGAAT CCGAGGACGG ATTGGGACGA CTGGAAGAAG
CTTCTGAAGG CGGCGGGCGT TCGAGACGCG CGGCTGCACG ACGCGCGGCA TACGGCTGCG
ACACTGGCTC TCCTGGCCGG CGTACTCGAT CGCACTGCAC AGGTCCTCTT CGGCTGGGCC
AATGCGAAGA ACGGCGAGCG GTACCGGCAT GTCACCCGCG CTGTACAGCG GGACGCAGCT
GATCGATTGG AAGCGCTCGT CTGGAGCCCG CGGCTGGCTT TGGAGAGCGG TGCTGCGCCT
CGGAGCGCAA CTCCTGAGGA TTAG
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| Protein sequence | MADCSPFSHG PERGLLSIKE AAAALGVSQS TMYKLIKEEK VQVDRSEGQT RVPSWAIDEY
MANPDRSKRA KRRSPSSRRN RPDGTRAPNG ESSIYFSDSD KLWHAWVTVG VKDDGSPDRR
HRKCKDEKAL RRRVNELVQA RDAGHVAKAG SSLVTVEQWL THWVENIAAL KVRPSTLASY
RVAVFHHLVP NIGRHRLEKI EPEHFEALYR KMLEAASKPA TVHQVHRTAR TAFGVAYTRR
LIPKNPVAFA TPPTVEEIEI DPYTVEEVER ILVTALKRRN GFRWVLALVF GFRQGEALGF
QWSDFRIDDE DTGNETIYVR RNRLRPKYSH GCSDPCARKW PGLCPQRVEL LPKTGSVKSK
AAERPFPVPR PIVFLARVHR EAQRQERLAA GPQWVDGGWV IATETGEAVN PRTDWDDWKK
LLKAAGVRDA RLHDARHTAA TLALLAGVLD RTAQVLFGWA NAKNGERYRH VTRAVQRDAA
DRLEALVWSP RLALESGAAP RSATPED
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