| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8562 |
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| Symbol | |
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| ID | 8339943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 9932505 |
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| End bp | 9933626 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644961646 |
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| Product | NLP/P60 protein |
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| Protein accession | YP_003119222 |
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| Protein GI | 256397658 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0614213 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0073147 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTGTCA ATGCCCGACA TCGTCGTCCG CGTGCCCCGA AGTACACCAA ACTGGCCCTC
GGCGCGGCTG CGGCCGGGAC CATGGTCCTG GTCCCCAGCG TCGCCAACGC CGACCCGCAG
CCGACCATCG CGCAGGTCAA CGACCAGCTG AACACGCTCT ACCAGCAGGC CGCCCACGCC
GACGAGGCGT ACAACGCGGC CCAGGACGCC GAGGCCAAGC TGCAGCAGCA GGTCGACGGC
ATCAACCGTG AGATGAGCGC CGAGCAGGCG ACCATGGCGC AGACCCAGAC CCGCCTCGGA
GGCCTGGCCG CCGAGCAGTA CCGCAACGGC GGCGTCGACC CGACCCTGCG CCTGATGATG
CAGGCCGACC CCTCCACGAT GTTGGACATG TCGGCGACCG TCGACCGTGT CCAAGCCGAC
AACGCCGGCA ACCTGAACCT GCTCGCGCAG CAGAAGGCTG ACCTGGCGGC CAAGGCCAAG
CAGGCCGCGG ACAAGATGGC ACTGCTGGAC CAGCAGACCA AGGCCGCCGA GGCGACCAAG
AAGCAGTACG ACGGCGACGT CTCCAAGGCC CAGGCGCTGC TGAACTCCCT GCAGGCGCAG
CAGCGCGCGG CGCTGAAGGC CGAGCAGGAC CGGCAGCACG CCGCGGCGCT CGCGGCTGCG
CAGCAGGCGG CAGCGAAGCA GTCTTCGTCT TCGAGCTCGT CGTCTTCCTC CGGGTCGTCC
TCGGGGTCCT CCTCGGGCGG TTCGACGACG GTGTCGGTCC CGGTGTCCGG GCGGGCTGCC
GCTGCGGTGG CGTTCGCGCA GGCGCAGCTG GGCAAGCCCT ACATCTTCGG CGCGACCGGC
CCGGGCGGGT ACGACTGCTC GGGGCTGTCG CAGGCGGCGT GGAAGGCGGC CGGCGTGTCG
ATCCCGCGGA CCGCCACGGC GCAGATGCAG GGGCTGCCGG CGGTGTCGGC TTCCTCGGCG
CAGCCGGGCG ACCTGGTGTT CTTCTATGGG AACAGCAGCT ATGTGGATCA CGTCGGGATA
TACATCGGCG GCGGCCGGGT CATTCACGCG CCGCATCCGG GTTCTTCGGT GGAGATCGTT
GCGGTGAGCA GCATGCCGCT GGTTTCTTAC GCGCGGCCTT AG
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| Protein sequence | MTVNARHRRP RAPKYTKLAL GAAAAGTMVL VPSVANADPQ PTIAQVNDQL NTLYQQAAHA
DEAYNAAQDA EAKLQQQVDG INREMSAEQA TMAQTQTRLG GLAAEQYRNG GVDPTLRLMM
QADPSTMLDM SATVDRVQAD NAGNLNLLAQ QKADLAAKAK QAADKMALLD QQTKAAEATK
KQYDGDVSKA QALLNSLQAQ QRAALKAEQD RQHAAALAAA QQAAAKQSSS SSSSSSSGSS
SGSSSGGSTT VSVPVSGRAA AAVAFAQAQL GKPYIFGATG PGGYDCSGLS QAAWKAAGVS
IPRTATAQMQ GLPAVSASSA QPGDLVFFYG NSSYVDHVGI YIGGGRVIHA PHPGSSVEIV
AVSSMPLVSY ARP
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