Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8559 |
Symbol | |
ID | 8339939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 9930269 |
End bp | 9930478 |
Gene Length | 210 bp |
Protein Length | 69 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644961643 |
Product | DNA binding domain protein, excisionase family |
Protein accession | YP_003119220 |
Protein GI | 256397656 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01764] DNA binding domain, excisionase family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.13355 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.000467423 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAGCCAGA CCAGAGACCG GCTCCTCACC GTCGACCAAG CAGCCGATCG GCTCAACACC GGCCCGCGTT TCGTCCGTCG CCTCATCGCC GAACGACGCA TCACCTACGT CCGTGTGGGA CGCCACGTCC GTATCCCCGA GTCCGCCATT GAGAACTACG TCCAGGCGGG AACCGTCGCA CCGATCGCCA ACCGAAGGAG GGCCGCGTAA
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Protein sequence | MSQTRDRLLT VDQAADRLNT GPRFVRRLIA ERRITYVRVG RHVRIPESAI ENYVQAGTVA PIANRRRAA
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