| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8467 |
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| Symbol | |
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| ID | 8339847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 9805478 |
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| End bp | 9807112 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644961554 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_003119131 |
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| Protein GI | 256397567 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0947398 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCGCGC ATACTTCCCA AGCGCCTTGG TGGCGCTCGG CCGCCATCTA CCAGATCTAC
CCGCGCAGCT TCGCCGACGG GTCCGGCGAC GGCATGGGCG ACCTGGCCGG CGTCCGCGCC
CGGCTGCCGT ACCTGGCCGA GCTCGGCGTG GACGCGGTCT GGTTCAACCC CTGGTACCTG
TCCCCGCAGG CCGACGGCGG CTACGACGTC ACCGACTACC GCGTCATCGA CCCGCTGTTC
GGGACCGTGG CCGACGCCGA GGCGCTCATC GCCGAGGCGC ACGAGCTGGG GATCCGGGTG
GTCGTCGACA TCGTCCCGAA CCACACCTCC TCGGCGAACC CCTGGTTCCA GGCCGCGCTG
GCCGCCGGTC CCGGCTCCCC GGAGCGCGAG CGGTTCTGGT TCCGCCCCGG CCGGGGCGAG
GACGGCGAGC TGCCGCCGAC CAACTGGCAG GGCATGTTCG GCGGCCAGAC CTGGACCCGG
GTCGTGGAGC CGGACGGCGA GCCCGGCGAG TGGTACCTGC ACCTGTTCGA CCAGGCCCAG
CCGGACTTCA ACTGGACGCA CCCGGACGTC CCGGCGGAGT TCGAGAGCGT GCTGCGGTTC
TGGTTCGACC GCGGAGCCGA CGGCTTCCGC ATCGACTCGG CAGCGCTGCT GGTCAAGGAC
CCGGCGCTGC CGGACCAGGT CGGCGAGGAC GACACGGCGT TCGTCGACCG CGAGGAGGTG
CACGCGGTCT ACCGGTCCTG GCGCGCGGTC GCCGACTCCT ATGAGGGCGA CCGGGTCCTG
ATCGGCGAGA TCTGGCTGCC GGACGCCGAG CGCCTCGCGC GCTACCTCGG CCCGGAGGAG
ATGCACACCG TCTTCAACTT CCCCTACCTG GGCTGCGCCT GGGAGGCGGA CAAGCTCCGC
GAGGTGATCG ACGAGACGCT GAGCCTGCAC ACCCCGGTCG GCGCGCCGCC GACCTGGGTG
CTGTCCAACC ACGACGTGGA CCGGGTGGTC ACCCGCTACG GCCGCGAGGA CACCTCCTTC
GCGATCTACG CCCGGCAGCT CGGCCGGCCG GTGGACCTGG AGCTGGGCAC GCGCCGGGCC
CGGGCGTCCG CGCTGCTGAC GCAGGCGCTT CCGGGCTCGG TGTACATCTA CCAGGGCGAG
GAACTCGGCC TGTGGGAGGT CGAGGACATC CCCGACGACC TGCGCCAGGA CCCGATGTGG
GAGCGCAAGG GCCGCAACCC GGCCAACCCG GGCCGGGACG GCTGCCGGGT GCCGCTGCCG
TGGTCCGGGA GCGAGCCGCC GTTCGGCTTC AGCCCGGAGG ACGCGCGGGA GCGGCCGTGG
CTGCCGCAGC CGGAGACCTG GAAGGACTAC ACCGCCGAGG GGCAGCTCGC CGACCCCTCC
TCGATGCTGA CGCTCTACGG CAAGTCGCTG CGGCTGCGGC GGGAGACCGC GGGGCTCGGC
GACGGGCCGT TCGCCTGGCT GGACGCGCCC GAGGGCGTGC TGGCCTTCGA GCGCGGACCC
GGGTTCGCCT GCGCGGTGAA CTTCGGCCCG CGACCGTCGG ACCAGCCGGT CGCGGGCCGA
GTACTGCTGG CCAGCGGGCC TTTGACGGCC GACGGGCAGA TCCCGCCCGA CACCGCCGTG
TGGATCGCCC GCTAG
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| Protein sequence | MSAHTSQAPW WRSAAIYQIY PRSFADGSGD GMGDLAGVRA RLPYLAELGV DAVWFNPWYL
SPQADGGYDV TDYRVIDPLF GTVADAEALI AEAHELGIRV VVDIVPNHTS SANPWFQAAL
AAGPGSPERE RFWFRPGRGE DGELPPTNWQ GMFGGQTWTR VVEPDGEPGE WYLHLFDQAQ
PDFNWTHPDV PAEFESVLRF WFDRGADGFR IDSAALLVKD PALPDQVGED DTAFVDREEV
HAVYRSWRAV ADSYEGDRVL IGEIWLPDAE RLARYLGPEE MHTVFNFPYL GCAWEADKLR
EVIDETLSLH TPVGAPPTWV LSNHDVDRVV TRYGREDTSF AIYARQLGRP VDLELGTRRA
RASALLTQAL PGSVYIYQGE ELGLWEVEDI PDDLRQDPMW ERKGRNPANP GRDGCRVPLP
WSGSEPPFGF SPEDARERPW LPQPETWKDY TAEGQLADPS SMLTLYGKSL RLRRETAGLG
DGPFAWLDAP EGVLAFERGP GFACAVNFGP RPSDQPVAGR VLLASGPLTA DGQIPPDTAV
WIAR
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