| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8452 |
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| Symbol | |
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| ID | 8339832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 9784319 |
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| End bp | 9786145 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644961539 |
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| Product | ABC transporter related |
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| Protein accession | YP_003119116 |
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| Protein GI | 256397552 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.030329 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00000193115 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGCGCCCC AAGCTGTCAA CCTGGTCAAC CTGGTCAACC TCGAGAACGT CTCCAAGGCC
TACACCGCCC GCACGCTGCT CGACAAAGTC TCCCTCGGCC TGTCCGAGGG CGACCGGATC
GGCGTGGTCG GACGGAACGG CGGTGGCAAG TCGACGTTGC TGCGGGTGCT GGCGAAACTC
GACGAGCCCG ACTCCGGGCG GGTCACGCAC ACCGGCGGGC TGCGCATCGC CTTCGTCGGG
CAGCACGACA CCCTGGACCC GGCCGCGACC ATCCGGCACG AGCTGGTCGC CGACAAGCCC
GACCACGAGT GGCTCGCCGA CGCGCGGGTG CGCGACGTCA TCACCGGGCT GTTCGGCGGG
ACCGACTTCC CGGCGTTCCC GGACGGCATG GACACCCGCA TCGGGCCGCT GTCCGGCGGC
GAGCGGCGCC GGGTCGCGCT GGCCAAGGCC CTGATCAACG AACACGACCT GCTGCTGCTC
GACGAGCCCA CCAACCACCT GGACGTCGAG GGCATCGCCT GGCTGGCGCG GCACCTGGCG
ACCGCCAAGC CGGCGCTGCT GACCGTCACC CACGACCGGT GGTTCCTGGA CGCCGTCACC
ACGCGGACGT GGGAGGTCGT CAACGGGCAG GTGCTCGACT ACGACGGCGG CTACTCCGCG
TACGTCCTGG CGCGCGCCGA GCGGCAGCGG CAGGCCGACG CCGAATGGGA CCGCAAGCAG
AACCTGCTGC GCAAGGAGCT GGCCTGGCTG CGGCGCGGTG CCCCGGCCCG GACCAGCAAG
CCGAAGTTCC GGATCGAGGC GGCGAACGAG CTGATCGCCG CCGAGCCACC GGCGCGCGAC
GGCGCGGAGT TGCAGAAGTT CGCGGCGAGC CGGCTCGGGC GGACCGTCTA TGAGTTGGAG
GACGTGTCCT ACGCCGTCGG CGAGGGCGCG GACCAGAAGG AATTGCTGAA GCGCGTCACC
TGGCAGCTGG GTCCCGGCGA GCGGCTGGGG CTGATCGGCG TCAACGGCTC CGGCAAGTCC
TCGCTGGTGC GGCTGCTGCT CGGCGAGGCG CAGCCGGACT CGGGACGGGT CGTCGCCGGT
GTCACGGTGA AGCCCGCGCA CCTGTCGCAG GAGGTGGCCG AGATCGATCC GACCTGGCGG
GTGCTGGAGG CGGTCGAGAA GGTCCACTCC ACGGTCGAGA TCGGCAAGGG CAAGACCCTG
ACGGCCGGGC AGCTGCTGGA GCGGTTCGGT TTCGCCGGGG AGAAGCAGTG GACGCGGGTC
GGCGACCTGT CCGGCGGCGA GCGGCGGCGG CTGCAGCTGC TCAGGCTGCT GATGGACGCA
CCGAACGTGC TGCTGCTCGA CGAGCCCACC AACGACTTGG ACATCGACAC CCTCACCGCT
TTTGAGGACA TCCTCGACGG CTGGCCGGGC ACCCTGCTGG TGGTCAGCCA CGACCGCTAC
TTCCTGGAGC GCACCACCGA CCGCGTCGCG GCCCTGTACG GCGACGGCCG GATCCGGCTG
CTGCCCGGCG GCGTCGAGGA GTACCTCGCC CACCGCGAGC AGCGCGCCAC TGAGCTTTCG
AACTCCCGCA CAACCAAAGT GCCCGCACAA CCGTCAAACA TGACGAGCGG CGGTGCGGGT
TCTCGTGAGG ACCGTGCCGC GAAGAAGGAG CTGGCCCGGA TCGAGCGGCG CCTGGACAAG
ATCGCCGAGC TGGAGGCCAA GCTGCACGAG GAACTGTCGC GGATTGGGGG AGACTATCTC
GCAGCGGCCG ATGCGGACGC TAAGCTACGC GAGTTGCATG AGGAACGTCT CCGTCTAGAG
GATGAGTGGC TCTCACTCTC CGAGTAG
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| Protein sequence | MAPQAVNLVN LVNLENVSKA YTARTLLDKV SLGLSEGDRI GVVGRNGGGK STLLRVLAKL
DEPDSGRVTH TGGLRIAFVG QHDTLDPAAT IRHELVADKP DHEWLADARV RDVITGLFGG
TDFPAFPDGM DTRIGPLSGG ERRRVALAKA LINEHDLLLL DEPTNHLDVE GIAWLARHLA
TAKPALLTVT HDRWFLDAVT TRTWEVVNGQ VLDYDGGYSA YVLARAERQR QADAEWDRKQ
NLLRKELAWL RRGAPARTSK PKFRIEAANE LIAAEPPARD GAELQKFAAS RLGRTVYELE
DVSYAVGEGA DQKELLKRVT WQLGPGERLG LIGVNGSGKS SLVRLLLGEA QPDSGRVVAG
VTVKPAHLSQ EVAEIDPTWR VLEAVEKVHS TVEIGKGKTL TAGQLLERFG FAGEKQWTRV
GDLSGGERRR LQLLRLLMDA PNVLLLDEPT NDLDIDTLTA FEDILDGWPG TLLVVSHDRY
FLERTTDRVA ALYGDGRIRL LPGGVEEYLA HREQRATELS NSRTTKVPAQ PSNMTSGGAG
SREDRAAKKE LARIERRLDK IAELEAKLHE ELSRIGGDYL AAADADAKLR ELHEERLRLE
DEWLSLSE
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