Gene Caci_8427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8427 
Symbol 
ID8339807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9756746 
End bp9757285 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content67% 
IMG OID644961514 
Producthypoxanthine phosphoribosyltransferase 
Protein accessionYP_003119091 
Protein GI256397527 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0634] Hypoxanthine-guanine phosphoribosyltransferase 
TIGRFAM ID[TIGR01203] hypoxanthine phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCAGG ACCTGGAGAA GGTCCTCATC CCCGCCGACG AGATCAAGGC CAAAGTGGCC 
GGGCTCGCCC GCGCTATCGA GGCCGACTAC CAGGGCAAGG AAGTGCTGCT GGTCGGCGTG
CTGAACGGCG CGCTGGTGGT GATGGCGGAC CTGATCCGCG AGCTGCACAT CGACTCCGAG
ATGGACTGGA TGGCGATCTC CTCCTACGGC GCGGGGACCA AGTCCTCCGG CGTGGTGCGG
ATCCTGAAGG ACCTCGGCGC CGACATCCAG GACCGGCACG TGCTGGTGGT CGAGGACATC
ATCGACTCCG GGCTGACCCT GTCCTGGCTG CTGTCCAACC TGCGCTCGCG CCGCCCGGCC
TCGCTGGAGG TGGTCACGCT GCTGCGCAAG CCCGACGCCG CCAAGGTCGC CATCGACGTC
AAGTACGTCG GTTTCGACAT CCCGAACGAG TTCGTCGTCG GGTACGGCCT GGACTACGCC
CAGCGCTTCC GCGGTCTGCC CTTCATCGGC ACACTCGCGC CGCACGTATA CAGTTCGTAG
 
Protein sequence
MGQDLEKVLI PADEIKAKVA GLARAIEADY QGKEVLLVGV LNGALVVMAD LIRELHIDSE 
MDWMAISSYG AGTKSSGVVR ILKDLGADIQ DRHVLVVEDI IDSGLTLSWL LSNLRSRRPA
SLEVVTLLRK PDAAKVAIDV KYVGFDIPNE FVVGYGLDYA QRFRGLPFIG TLAPHVYSS