Gene Caci_8384 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8384 
Symbol 
ID8339763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9711508 
End bp9712395 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content74% 
IMG OID644961470 
ProductNADP oxidoreductase coenzyme F420-dependent 
Protein accessionYP_003119048 
Protein GI256397484 
COG category[S] Function unknown 
COG ID[COG5495] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.841409 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTCCG CAGAGTCCCG CCTGGCGGTC GGGGTCGTCG GCACCGGCCG CGTCGGCTCG 
GCGCTCGGCG CCGCCCTCCA GCGCGCCGGC CACCGCGTGG TCGCCGCCTC CGGCGTCTCC
GAGCAGTCGG TCCGACGTGC CGACAAGCTC CTCCCCGACG TACCCCTGCT ACCGCCGCAG
GAAGTGCTGG CAGTCGCCGA CCTGGCGCTG CTCACCGTCC CCGACGACGC GCTGCCCGGC
CTGATCGAGG GCCTCGTGGC GACCGGCTCG ATCAAGCCGG GGACGATACT GGCCCACACC
TCCGGCCGCT TCGGCTACAC CGTCCTGGAC GCCGCGACAC GCGCCGGCGC CCTGCCGCTC
GCGCTGCACC CCGCGATGAC CTTCACCGGC ACCGAGGTGG ACGTGGCGCG GCTGGCCGGG
TGCTCCTTCG GGGTGACCGC GCCGGACCCG CTCCGTCCCA TCGCCGAGGC GCTGGTGGTG
GAGATGGGCG GGGAGCCGGA GTGGATCGAG GAGTCGGCGC GTCCGCTGTA CCACGCAGCC
CTCGCGTACG GCTCGAACTA CCTGGTCACT CTGGTCGCGC AGGCCAAGGA CCTGCTCGCC
GCGGCGGGCG TCCGGGAGCC GGGCCGCATG CTCGGCCCGC TTCTCGGCGC CGCGCTGGAC
AACGCCTTGC GCTCCGGCGA CTTGGCGCTG ACCGGTCCGG TGGCGCGCGG TGACGCCGGA
ACCGTGGCGG CGCATCTGGA GGTCCTTGCG GAGCGGGACC CCCAGGCTGC CCGTGGCTAT
CGCGCCCTAG GACGCCTCAC CGCGGACCGC GCCATGGCCT CCGGACTGCT CTCCGCCGAG
AAAGCCGAAT CGCTGCTCGG AGTTCTGAAC AAGGAGCCTG ACGCATGA
 
Protein sequence
MDSAESRLAV GVVGTGRVGS ALGAALQRAG HRVVAASGVS EQSVRRADKL LPDVPLLPPQ 
EVLAVADLAL LTVPDDALPG LIEGLVATGS IKPGTILAHT SGRFGYTVLD AATRAGALPL
ALHPAMTFTG TEVDVARLAG CSFGVTAPDP LRPIAEALVV EMGGEPEWIE ESARPLYHAA
LAYGSNYLVT LVAQAKDLLA AAGVREPGRM LGPLLGAALD NALRSGDLAL TGPVARGDAG
TVAAHLEVLA ERDPQAARGY RALGRLTADR AMASGLLSAE KAESLLGVLN KEPDA