Gene Caci_8377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8377 
SymbollysS 
ID8339756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9703913 
End bp9705433 
Gene Length1521 bp 
Protein Length506 aa 
Translation table11 
GC content70% 
IMG OID644961463 
Productlysyl-tRNA synthetase 
Protein accessionYP_003119041 
Protein GI256397477 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1190] Lysyl-tRNA synthetase (class II) 
TIGRFAM ID[TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAA CCACCCCGCC TCCGGCGCAG CCCGAGTCCG ACCTCCCTGA GCAGATCCGC 
ATCCGCCGGG AGAAGCTGGA CAAACTGCGC GAGCGCGGCG TGGACCCGTA CCCGGTCGGG
TACCCGCGGA CCGCGACCGT CGCGGAGCTC CGGGCCGAAT ACAGCGATCT GGAGGCGGAC
GTCGCCACCG GGCAGCGCGC CGGGATCACC GGGCGCGTCG TGCTCTCGCG CACCGGCGGC
AAGCTGTGCT TCGCCACGCT GCGCGAGGGC GAGTTCGAGA TCCAGGCGAT GTTCTCGCTG
GACCGGCTCG GCGCGGAGTC GCTGGAGAAC TGGAAGGGCG ACGTCGACCT CGGCGACCTG
GTCGGCGTCA CCGGTGAGAT CATCACCTCG CGGCGCGGCG AGCTCTCCAT CATGGTCGAG
AGCTGGGCCA TCACCGCGAA GTGCCTGCGG CCGCTGCCGG ACAAGCACAA GGGACTCAAC
GACCCGGAGG CGCGCGTGCG CCAGCGGTAC GTCGACCTGA TCGTGAACCC CGAGGCGCGG
CGGATGCTGT TCACACGCTC GGACCTGGTC CGCTCGCTGC GCTCCAGCCT GGGCCGGCGC
GGGTACACCG AGGTCGAGAC GCCGATGCTG CAGCCGATCC ACGGCGGCGC GAACGCCCGG
CCCTTCGAGA CCCACATCAA CGCCTACGAC ATGAAGCTCT ACCTGCGCAT CGCCCCGGAG
CTGTACCTCA AGCGGCTGCT GGTCGGCGGC GTGGAGAAGG TCTTCGAGAT CAACCGGAAC
TTCCGGAACG AGGGCGCGGA CTCCACCCAC AGCCCGGAGT TCACCATGCT GGAGGCCTAC
GAGGTCTACG GCGACTACGA CGTCATGCAG AAGCTGACGC AGCAGACGAT CCAGGAGGGC
GCCGAGGCGA TCTTCGGCTC CCAGGTCGCC CGCCGGCTCA ACGCCGAGGG GGAGGTCGAG
GAGTTCGACA TCAGCGGGGA CTGGAAGTCG GTCACCGTCA ACGACGCGGT CTCCGCCGCG
CTCGGCGAGG AGATCTCCGC CGACACCGAG ATCGGCGCGC TGAAGAAGCT GTGCGACTCC
GCCGGCATCC CCTACGCCCC GGGCTGGACG CGCGGCCAGG TGGTGCTGGA GATGTACGAG
CACCTGGTCG AGGACAAGAC GGTCCTGCCG ACGTTCTACC GGGACTTCCC GAAGGACGTC
TCGCCGCTGA CCCGGGCGCA CCGCACCGAT CCGCGGCTCG CCGAGCGCTG GGACCTGGTC
GGCTGGGGCG CGGAGATCGG GACCGGCTAC TCCGAGCTGA TCGACCCGGT GGACCAGCGC
GAGCGGTTCA CCGAGCAGTC GCTGCTGGCG GCCGGGGGAG ACCCGGACGC GATGCAGTTG
GACGAGGACT TCCTGCGGGC TCTGGAATAC GCGATGCCGC CCGCCGGCGG AATCGGCGTC
GGCATCGACC GGATTCTGAT GGCGCTCACC GGGCGGCTGA TCCGGGAGAC CATCCTGTTC
CCGTTCGTGA AGCCCGCGTA G
 
Protein sequence
MTETTPPPAQ PESDLPEQIR IRREKLDKLR ERGVDPYPVG YPRTATVAEL RAEYSDLEAD 
VATGQRAGIT GRVVLSRTGG KLCFATLREG EFEIQAMFSL DRLGAESLEN WKGDVDLGDL
VGVTGEIITS RRGELSIMVE SWAITAKCLR PLPDKHKGLN DPEARVRQRY VDLIVNPEAR
RMLFTRSDLV RSLRSSLGRR GYTEVETPML QPIHGGANAR PFETHINAYD MKLYLRIAPE
LYLKRLLVGG VEKVFEINRN FRNEGADSTH SPEFTMLEAY EVYGDYDVMQ KLTQQTIQEG
AEAIFGSQVA RRLNAEGEVE EFDISGDWKS VTVNDAVSAA LGEEISADTE IGALKKLCDS
AGIPYAPGWT RGQVVLEMYE HLVEDKTVLP TFYRDFPKDV SPLTRAHRTD PRLAERWDLV
GWGAEIGTGY SELIDPVDQR ERFTEQSLLA AGGDPDAMQL DEDFLRALEY AMPPAGGIGV
GIDRILMALT GRLIRETILF PFVKPA