Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8377 |
Symbol | lysS |
ID | 8339756 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 9703913 |
End bp | 9705433 |
Gene Length | 1521 bp |
Protein Length | 506 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644961463 |
Product | lysyl-tRNA synthetase |
Protein accession | YP_003119041 |
Protein GI | 256397477 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAAA CCACCCCGCC TCCGGCGCAG CCCGAGTCCG ACCTCCCTGA GCAGATCCGC ATCCGCCGGG AGAAGCTGGA CAAACTGCGC GAGCGCGGCG TGGACCCGTA CCCGGTCGGG TACCCGCGGA CCGCGACCGT CGCGGAGCTC CGGGCCGAAT ACAGCGATCT GGAGGCGGAC GTCGCCACCG GGCAGCGCGC CGGGATCACC GGGCGCGTCG TGCTCTCGCG CACCGGCGGC AAGCTGTGCT TCGCCACGCT GCGCGAGGGC GAGTTCGAGA TCCAGGCGAT GTTCTCGCTG GACCGGCTCG GCGCGGAGTC GCTGGAGAAC TGGAAGGGCG ACGTCGACCT CGGCGACCTG GTCGGCGTCA CCGGTGAGAT CATCACCTCG CGGCGCGGCG AGCTCTCCAT CATGGTCGAG AGCTGGGCCA TCACCGCGAA GTGCCTGCGG CCGCTGCCGG ACAAGCACAA GGGACTCAAC GACCCGGAGG CGCGCGTGCG CCAGCGGTAC GTCGACCTGA TCGTGAACCC CGAGGCGCGG CGGATGCTGT TCACACGCTC GGACCTGGTC CGCTCGCTGC GCTCCAGCCT GGGCCGGCGC GGGTACACCG AGGTCGAGAC GCCGATGCTG CAGCCGATCC ACGGCGGCGC GAACGCCCGG CCCTTCGAGA CCCACATCAA CGCCTACGAC ATGAAGCTCT ACCTGCGCAT CGCCCCGGAG CTGTACCTCA AGCGGCTGCT GGTCGGCGGC GTGGAGAAGG TCTTCGAGAT CAACCGGAAC TTCCGGAACG AGGGCGCGGA CTCCACCCAC AGCCCGGAGT TCACCATGCT GGAGGCCTAC GAGGTCTACG GCGACTACGA CGTCATGCAG AAGCTGACGC AGCAGACGAT CCAGGAGGGC GCCGAGGCGA TCTTCGGCTC CCAGGTCGCC CGCCGGCTCA ACGCCGAGGG GGAGGTCGAG GAGTTCGACA TCAGCGGGGA CTGGAAGTCG GTCACCGTCA ACGACGCGGT CTCCGCCGCG CTCGGCGAGG AGATCTCCGC CGACACCGAG ATCGGCGCGC TGAAGAAGCT GTGCGACTCC GCCGGCATCC CCTACGCCCC GGGCTGGACG CGCGGCCAGG TGGTGCTGGA GATGTACGAG CACCTGGTCG AGGACAAGAC GGTCCTGCCG ACGTTCTACC GGGACTTCCC GAAGGACGTC TCGCCGCTGA CCCGGGCGCA CCGCACCGAT CCGCGGCTCG CCGAGCGCTG GGACCTGGTC GGCTGGGGCG CGGAGATCGG GACCGGCTAC TCCGAGCTGA TCGACCCGGT GGACCAGCGC GAGCGGTTCA CCGAGCAGTC GCTGCTGGCG GCCGGGGGAG ACCCGGACGC GATGCAGTTG GACGAGGACT TCCTGCGGGC TCTGGAATAC GCGATGCCGC CCGCCGGCGG AATCGGCGTC GGCATCGACC GGATTCTGAT GGCGCTCACC GGGCGGCTGA TCCGGGAGAC CATCCTGTTC CCGTTCGTGA AGCCCGCGTA G
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Protein sequence | MTETTPPPAQ PESDLPEQIR IRREKLDKLR ERGVDPYPVG YPRTATVAEL RAEYSDLEAD VATGQRAGIT GRVVLSRTGG KLCFATLREG EFEIQAMFSL DRLGAESLEN WKGDVDLGDL VGVTGEIITS RRGELSIMVE SWAITAKCLR PLPDKHKGLN DPEARVRQRY VDLIVNPEAR RMLFTRSDLV RSLRSSLGRR GYTEVETPML QPIHGGANAR PFETHINAYD MKLYLRIAPE LYLKRLLVGG VEKVFEINRN FRNEGADSTH SPEFTMLEAY EVYGDYDVMQ KLTQQTIQEG AEAIFGSQVA RRLNAEGEVE EFDISGDWKS VTVNDAVSAA LGEEISADTE IGALKKLCDS AGIPYAPGWT RGQVVLEMYE HLVEDKTVLP TFYRDFPKDV SPLTRAHRTD PRLAERWDLV GWGAEIGTGY SELIDPVDQR ERFTEQSLLA AGGDPDAMQL DEDFLRALEY AMPPAGGIGV GIDRILMALT GRLIRETILF PFVKPA
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