| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8359 |
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| Symbol | |
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| ID | 8339738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 9683283 |
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| End bp | 9686300 |
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| Gene Length | 3018 bp |
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| Protein Length | 1005 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644961445 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003119023 |
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| Protein GI | 256397459 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAGACC ACGACTCGAA CGCCACGGAT CCCCGCGATC CCGCGGACCC GGTGAACCGG
GACAGCGTCT CCGACAGTTG GGGGCGCGCG GCGGCCTATG ACGCCTACGC GGACGGTCTG
CACACCTACG CCCTCGGCGG CCTGCGCCAC CACGAAGCCG CCGCCTCGGC GGTCTACTGT
GCCTTCGTCG CCGCCGACCA TCATGTGGCG CACCTCGGCG ACGCCGAGAT GCTGCGGCCG
TGGCTGTACG CGATCACGCG GCACTACTGC CGGGCCGGGA AGCTGCCGCG GCTGCGCCTG
ACCGCCTCCT CGGCTCCGGT CCCGGCGCCT AAGGACGCGG CGATGGCCGG GCTGGAGCGC
ACCCTGCTCT CGGCGGAGCT GGCCTCCCTG GACTGGCCGG ACACCGACGG GCTGAGCGCG
GCGCACCGCG AGGTGCTGGA GCTCTCGGTC CGCCACGGGA TGGAGAGCCG CGCGGTCGGG
ATGATGCTCG GCAAGCCGGC GGCGGAGTCG TTCGAGGTCC TGTCGCAGGC CTGGCACGAG
CTGGAGCGCT CGCTGGCGGC GCTGGCGCTG CTGCGCACCT CCCGCGCGCA CTGCTCGGAC
CTGGCCGCGC TGGCCGAGGG CTGGTCCGGG CGGCTCACCG CACAGCGCCG CGAACCGCTG
GTCACACACG TCGACGCCTG CTCGCGCTGC CAGTACTACC TGCACAAGGT GCTCGGGGCG
CCGCAGGCTC CGTCGATCCT GCCGCACGTC CCGGCGCCGA AGGAGCTGCG CGAGCGGGTC
CTGGGCGACC TGCTGGACAG CACCCCGGAG AAGGCGGCGG AGAAGGACGC GATCGCCACC
CGGCTGACGC GCTTCGACCC CTTCGGGTTC CCGGCGATAG CGACGACGCG GCCGCCGTCG
GCGCGGCCGC AGCACCCGCA CCGCGCCGCC GCGCCGATGC CGGTGGAGCG CCGTCCGAGG
CGGCTGAGCG CCCTGCTGGC CGGCCGGGTC TCCTCGGCCG CCGCCGAAGC GGTCGCCGGC
GAGGTGGCCA CGGTTCCGGA ACGATTACGC ACCCCGGCTG CCGCGTCTCC GGACGCGAAG
CAGCCGGCGA ACACGATGCC CGAGAGAAGT GCTTTCGATG CTGCTGTTGT GACCGCCGGG
AACGACCGGC GCCGGTGGCT GCGCCGCGGT TCGGCGGAGC TGGACGAGGG CCCGATCGCC
GCGCGCCGGG GGCTTGCGGG CGATTCCGGG ACGCCGCAGC GGGGTGGTGC GGCGACCGGG
GACACGCGGG ATTTGAGGAA TGCGGAATCC GGTGTCGAAC GGAGCCCGAG GACGGCGGAG
TTCGGTGCCG AGCGCGGCGG ACTGGCCGAG GACCTGCTCG GCGGCCCGGC TGCGGAGCCG
CGCCGCGAAG GGCTCGAACG CGGGAATCGG GCGGCGGGAT CGCTCGCCGC GGATGTGCTC
GCGGAACTGG GCGCCGAGCG TGGTCGTGAG GGCGAGCGGA AAGACCTCTC GACGAGCGCG
CCCCACGGCG GCGCCGACAC CACTGGCGAC GAACCGACCG AAATCATCGG CGCTCTCCGC
CCCGAAGACC TCATCGCCTC CTTCGGTCCG GCGCGGAACT CCTCCGTCGA GGACACGCTG
ATCACCGCCC GCACCGAGCG CCGGCCCGGC GTCTTCGACG ACGTCCGGCC TGTCCGCCCG
ACTCCCACCC GCACCCGGAA ACCGGTTCCC CGCAGCTCTG TCGCCGCCGC TGTCGAAGGC
CGGCGGCGCG GCGTCGAGGA CGCGCAGCGC GGTGTCGCGC CGGTCGGCGA CGCGTATGAG
GCTGCTGCGA CCGTCGCGGC GTCGGTGGCG GCCGGGGATG CCGGCGCGCA GGTGCCGCCG
ATCGCGCCGG CGGGGGTCAT GCCGACCGCC GTCATGCCGC TCGGGATGAT GCCCGGCGGC
CGGGCGCCGC GCGACAACGC GCGGGTGTTC CAGCGGCCCG TCGGCGGTGC GCAGGACGCG
CGGAGGCGGA AGTCGGGTGT GAAGTCCGCG CTCGCCAGTT CCGCCGTGCT CAGCGGGGTC
GGCGCGGCCG GGGTGACGGC GTTCGTGCTC TTCGTGCCGT CCTCGCCCGG CAGCAACAAG
ACGCTGTTCT CGCCGCCGGA TCCCGGTGCC AACTCCGCGC AGACGCCGGA CTACCCGCGT
CCCAGTTCCA GCGCGGACGC CGGACCGGCA CTGCCGGTCG CCGGCGGCGC GCGCGCGAGC
GGGATGCCGG GCGAGGACAC CGTGACCGCG CAGGTGGTCG CGGCGGAACT GCCGACGGCG
CCGACGACGC CGACGTCGGC CGCGGCGCCC GTCGCGACGG ACACGCTGCC GTTCAACGGC
CCGATCGACC CGCCGCCCTC GCAGACCGAC CCCTCGCAGG CTCCGAGCGA CGGCGGGCAG
CTGCACATCA GCGTCTCGCA GCGCTCGAAC AACCCGCACG ACGTGGTCGT CACGCTCTGG
AACTCCGGCA CCTCGCCGGT CAGCTGGACC GCGACCCCCG ACGCCGCCTG GCTCACCCCG
AGCGCCACCT CCGGCATGCT GGCCGGCGGC GCCCAGACCT CGCTGCACGT CCTGGTGGAC
GCCGCGGGCG AGCCGAAGGG CCCGTGGACC GCGCACGTGC GCTTCGACCC CAGCGGACAG
ATGGTCTCCA TCAACGGTGT CGGCGGCGGT TCCGGCGGCG GCAGCCCGAG CGGTCCGAGC
AAGCCGAGCA GTCCGGGCGG CCCGACCAGC AGCTCCCCGT CCGGCGGCGG CTCCAGCACG
CCGTCCTCGC CGCCGAGCAG CAGCACGCCG TCCGGGACGC CGACCAGTCC GGTCAGCAGC
CCGAGCGCGC CGCACAGCTC GGCCAGCTCG ATGCCCTCGG GCCAGAGCGG GAGCGGGCCC
ACGCGCAGTC CGGTTTCGCC GAGCGGTCCT GGCTCCTCGG GCTCTTCCAG CTCTTCGAAA
TCCCCGAATC CGCCGAGGCA TTCCAAGGGC CCGGATCCCT CACCGCGACC CTCAGGGTCC
ACCAAGCCGC ATCACTGA
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| Protein sequence | MKDHDSNATD PRDPADPVNR DSVSDSWGRA AAYDAYADGL HTYALGGLRH HEAAASAVYC
AFVAADHHVA HLGDAEMLRP WLYAITRHYC RAGKLPRLRL TASSAPVPAP KDAAMAGLER
TLLSAELASL DWPDTDGLSA AHREVLELSV RHGMESRAVG MMLGKPAAES FEVLSQAWHE
LERSLAALAL LRTSRAHCSD LAALAEGWSG RLTAQRREPL VTHVDACSRC QYYLHKVLGA
PQAPSILPHV PAPKELRERV LGDLLDSTPE KAAEKDAIAT RLTRFDPFGF PAIATTRPPS
ARPQHPHRAA APMPVERRPR RLSALLAGRV SSAAAEAVAG EVATVPERLR TPAAASPDAK
QPANTMPERS AFDAAVVTAG NDRRRWLRRG SAELDEGPIA ARRGLAGDSG TPQRGGAATG
DTRDLRNAES GVERSPRTAE FGAERGGLAE DLLGGPAAEP RREGLERGNR AAGSLAADVL
AELGAERGRE GERKDLSTSA PHGGADTTGD EPTEIIGALR PEDLIASFGP ARNSSVEDTL
ITARTERRPG VFDDVRPVRP TPTRTRKPVP RSSVAAAVEG RRRGVEDAQR GVAPVGDAYE
AAATVAASVA AGDAGAQVPP IAPAGVMPTA VMPLGMMPGG RAPRDNARVF QRPVGGAQDA
RRRKSGVKSA LASSAVLSGV GAAGVTAFVL FVPSSPGSNK TLFSPPDPGA NSAQTPDYPR
PSSSADAGPA LPVAGGARAS GMPGEDTVTA QVVAAELPTA PTTPTSAAAP VATDTLPFNG
PIDPPPSQTD PSQAPSDGGQ LHISVSQRSN NPHDVVVTLW NSGTSPVSWT ATPDAAWLTP
SATSGMLAGG AQTSLHVLVD AAGEPKGPWT AHVRFDPSGQ MVSINGVGGG SGGGSPSGPS
KPSSPGGPTS SSPSGGGSST PSSPPSSSTP SGTPTSPVSS PSAPHSSASS MPSGQSGSGP
TRSPVSPSGP GSSGSSSSSK SPNPPRHSKG PDPSPRPSGS TKPHH
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