Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8334 |
Symbol | |
ID | 8339713 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 9659627 |
End bp | 9660553 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644961420 |
Product | hypothetical protein |
Protein accession | YP_003118998 |
Protein GI | 256397434 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0824373 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATCCGT CGCTGGAACC GCGTAGTCGC GCTGGTAGGG CAGCGCGCAG CTTCCACGGG CGGTATGCGC AACCGATCAG CCACCAGCCA CTTCCGCAAG CCGTCGCCAA TCTGCCCACC CACCGGTCGA TCGTCGTCGT GGACGTCGTC TCGTTCACGC GGCCGGACAG GGACAACGTC GATCAACTGG CTATTCGCGC CGCGCTTTAC GAGACACTGC GCGACGCATT CGAGGATTCC GGAATCCCGT GGCGGCAGAC CGTGCGGGAG GACCGGGGGG ACGGCGTGCT GATCTTCATC TCGGCCGAGG TCTCCAAGGT CCTGCTGCTC GGCCGGATGC CGGCGCGGCT GGCCGAACTG CTGGAGCGCG GCAACACCAA GCGCAGCGCG CGGCAGCGGT TCGGGCTGCG GGTGGTGGTG CACGCCGGAG AGGTCCACCA CGACGCGCAC GGCTACGCCG GCTACGACGT CAACCTGGCC TTCCGCCTGG TCGACGCCTG CCCGCTGCGC GAGGCGATGG AGCACAGCGC GGCGACCGTG GGTCTGATCG TGTCCGAGGG CGTGCACGAC GGGGTGCTGC GCCACGGCTA CGGCGGTCTG GACGTCGCGG CGTTCGAGCA GGTCCGGGTG CAGGTGAAGT CCGCCGACGT GCCTGGCTGG ATCCAGCTGT TCGGCGGCGG GTCGGTGCTC CCGGTGCCGC TGCAGGTGGT GCGGTCGGTG CCGGAGACGG AGCCGGCCGC TATCGCGGGG CGGGGAGGCG AGGGACCGGT GGCGGTCCTG CTCGCCGACG AGGCCTCGCT GCTCGACGAA CTGGCCGGGC TCGGGGTGCG CACCGTGGTC CTGGTCGGCG GGGCGGCCGG GCTGGCCGCG GGGCTTGCCT CGATAGCTCG GCAGCCGATA TATATCGACC ATGAGTTCAT CGAGTAG
|
Protein sequence | MNPSLEPRSR AGRAARSFHG RYAQPISHQP LPQAVANLPT HRSIVVVDVV SFTRPDRDNV DQLAIRAALY ETLRDAFEDS GIPWRQTVRE DRGDGVLIFI SAEVSKVLLL GRMPARLAEL LERGNTKRSA RQRFGLRVVV HAGEVHHDAH GYAGYDVNLA FRLVDACPLR EAMEHSAATV GLIVSEGVHD GVLRHGYGGL DVAAFEQVRV QVKSADVPGW IQLFGGGSVL PVPLQVVRSV PETEPAAIAG RGGEGPVAVL LADEASLLDE LAGLGVRTVV LVGGAAGLAA GLASIARQPI YIDHEFIE
|
| |