Gene Caci_8259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8259 
Symbol 
ID8339638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9568131 
End bp9569087 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content77% 
IMG OID644961345 
ProductCHAD domain containing protein 
Protein accessionYP_003118923 
Protein GI256397359 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGCAG CGACTCAGCG TGCGATGGCC GGATTCGGGG CGGCGACGCC CGACGGACCG 
GCGGGACTGG CGGTCCGGGG GTACCTCGCC GAGCAGTCGC GCGCCTTCCT GACACACAGC
GCGCTGCCGG TGCAGCAGCC GGCGGCGGTG CGGCTGCGCG CGGCGTGCCT GCGGGTGGGC
ACGGCGCTGG CGGCGTGCCG GGACCTGGTG GACGCGGTCT GGGCCGACGA GCTCGGCCGG
GAGCTGCGGA GCACCGCGGT GGTGCTCGGC GCCGAGCGGG ACGCCGACGC GGTACGGCCG
CGGCTGCTGG CGCCGCTGGA CCGCTGGATC GCCGAGGGCC GCTATCCCGA CGGCGGTGCC
GCGCGCACCC GCACTTTGCT GACCCGCATG CTGGACCGGG AGCGCTCGGC GGCGCACAGC
CAGGCCACCG CGGCGCTGGT CGGCCCGGCC TTCCACGCGC TCGCGGACCG AATGGCCACG
CTGGCCCGGG ACGTGCCGCT GACCCCGGTC GCCGACCAGC CCTGCCGGCA GGTCCTCCCG
GAGGTCGCCG AGGGCGCCTA CGAGGAGTTC GCGCGCCGGG TCCGGGAGCT GCCCGAGCCG
CTGGCCGCCG AGGACCCCGC CGGCGACGCC GCCTGGCTGG CCGCCGACGA CGCCGGCCAG
GCCGCGCTGC ACACCGCTGA ACTGTGCCGC CCCGCCGGTA CGCTGATCGC GGGCGATGAT
CCGGCCGACC TGGTGGCCCG GCTGGCGCGG CTCGCCGAGG CGCTCGGCGA GCAGCGCGAC
GCGGTCCTGG CCGCGGCGTG CGTCCATCGG GCGGCCGACA CACCGCGCAT CGCGGCCACG
ACCGGATATG TACTGGGAAG ACTGCACGAG GAACAACGCC TGGCCGTGAT CCGGGCCCGG
AGCACGGCAC CGCTGGCCGG ACAGCCGGCG GGGCGAGAGA GGTCCGCGCA CTCATGA
 
Protein sequence
MDAATQRAMA GFGAATPDGP AGLAVRGYLA EQSRAFLTHS ALPVQQPAAV RLRAACLRVG 
TALAACRDLV DAVWADELGR ELRSTAVVLG AERDADAVRP RLLAPLDRWI AEGRYPDGGA
ARTRTLLTRM LDRERSAAHS QATAALVGPA FHALADRMAT LARDVPLTPV ADQPCRQVLP
EVAEGAYEEF ARRVRELPEP LAAEDPAGDA AWLAADDAGQ AALHTAELCR PAGTLIAGDD
PADLVARLAR LAEALGEQRD AVLAAACVHR AADTPRIAAT TGYVLGRLHE EQRLAVIRAR
STAPLAGQPA GRERSAHS