Gene Caci_8239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8239 
Symbol 
ID8339618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9550955 
End bp9551515 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content71% 
IMG OID644961325 
Productaerial mycelium formation protein 
Protein accessionYP_003118903 
Protein GI256397339 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.486623 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCACCC ACGCCACCAG ACTCGACCGC GTCCTGATCG CCGCCCGGCG CCCGGACGCG 
GAGGTCGAGG CCCTCGAAGT CGCCGCCATC CGCAGGGAGC GCGGCGACGC GCTCCGAGAG
GAGACCGAAC TCTCCTACCT CCGCCGGGTC CTGCACGGCC GGATCGACAT AATCGACGCC
GAGCTGCGGC GGCGCGCCGA GGGGTCGGCC GAGCCGCTGG TGCAGTCGCT GGCGGCGATC
CTGGCCGACG ACCCGCCGGC CAACGCGCGT TCGCCGCGGC ACATGGACAT CGGCATCCTG
CCGGACCCCG ATCCCGGCGA GTACCGCTCG CAGATGGAGG AGCGGATCGA CGCGGTCGGC
CCGGCGATCG TGCTGGACCT GTCCGACGGA CAGCTGGGCG AGGCGCGGCT GACGCTCAAG
GCCTATGAGC GGGAGGTCTC CGAGTACCGG CGCATCGCGC AGGCGGTGAT CGACCGGTTC
GCGGACGAGC TGGCGCGCCG CTACCGTGAG GGGCAGGCAA CCGTCGACGA TCTGCTCAAT
GAGGAGCAGA AGATGGAGTA A
 
Protein sequence
MGTHATRLDR VLIAARRPDA EVEALEVAAI RRERGDALRE ETELSYLRRV LHGRIDIIDA 
ELRRRAEGSA EPLVQSLAAI LADDPPANAR SPRHMDIGIL PDPDPGEYRS QMEERIDAVG
PAIVLDLSDG QLGEARLTLK AYEREVSEYR RIAQAVIDRF ADELARRYRE GQATVDDLLN
EEQKME