| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8232 |
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| Symbol | |
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| ID | 8339611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 9543878 |
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| End bp | 9545419 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644961318 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003118896 |
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| Protein GI | 256397332 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTTCG AATCCCGAAC TCCCAGCGCT CCGGGCGCTC CTCGCGCTCC CCGAACTCCC
CGAACTCCCC GCCCCGCCGG GTCGCCGCGG CTCGCCCTCG CGGTGATCGC CGCCAGTGCC
CTGATGGCGG TCCTGGACGG CAGCATCGTC ACCGTCGCCA TGCCCTCCAT CCAGTCCCAC
CTCGGCTTCT CGCCCGCCGG CCTGAGCTGG GTGGTGAACG GCTACCAGCT CGCCTTCGGC
GGCCTGCTCC TCCTCGCCGG CCGCCTCGGC GACCTGCTGG GCCGCAAGCG CGTGTTCCTG
GCCGGCATCG CGCTGTTCCT CGCGGCCTCG GCCGTGGCCG GCGCCGCGAC CTCGCCGGCG
ATGCTGGTCG CGGCCCGGTT CGCGCAGGGC GTCGGCGGCG CGGCGTCCTC GGCGGTGAGC
CTGGGCATCC TGGTGACGCT GTTCACCGAG CCGCGCGAAC GGGCCAAGGC GCTCGGCGTC
TTCGCCTTCA CCGGAGCCGC CGGCGCCTCG ATCGGCCAAG TGCTCGGCGG GGTCCTGACC
GACGCGCTGA GCTGGCACTG GATCTTCCTG ATCAACATCC CGATCGGGCT GCTGACCCTC
GCTGCCGCGG TCCGGGTGAT CCCGACCGAC CGAGGCCAGG GCTTGCGCGC CGGCGTGGAC
GTGAGCGGCG CGCTGCTGGT CACCGGCGGC CTGATGCTCG CCATCTACAC CGTGGTCGGC
ACCGCGGACC ACGGCTGGGG TTCGTCCCGC ACGCTCGGGC TCGGAGCCCT GTCCGTCCTC
CTGATCGCGG GCTTCTTCGT CCGCCAGGCC ACCGCCGCCA ACCCCCTGAT GCCGCTGCGC
ATCCTGCGCT CGCCCGGCGT CGCCGCCGCG AACGTGGTGC AGATGCTGAT GATCGCGGCG
ATGTTCGCCT TCCAGATCAT CGTCGCCCTC TACATGCAGC GAGTCCTCGG CTACGACGCC
ACCGAGACCG GCCTGGCGAT GCTCCCGGCG GCGGTGGCGA TCGGCGGCGT GGCGCTGGGA
GTGTCAGCCC GCCTGATCGC GAAGTTCGGC GCCCGCAGTG TCCTGATCAC CGGTCTGGCG
ATGCTCACCG GCGCCCTCGC GCTGCTGCTG CGCATGCCGA CGCACGCCAA CTACGTCCGT
GACCTACTCC CCACGATGCT GCTGATCGCC GGCGGCGGCC TGGCGATGCC CGCGACCGCC
GGGCTCGGCA TGTCCGGCGC CCGCGAGCAG GACGCCGGCC TGGTCTCCGG GCTCTACAAC
ACCACCCAGC AGGTCGGAGC CGCGATCGGG GCGGCGGTCC TGTCCACGCT CGCCGCCGGA
CGCACCGCGC ACCTGCTGCG CGCCGGCCAC AGCCCGGCGG AAGCGCTGAG CAGCGGGTAC
CACGCGGCGT TCATGATCGG CGTCGGACTG CTGGCGGTGG CGCTGATCGT GGCCGTGTTC
GCGCTGCGCG ACGCGCCGGA GCAGGACGCC CCGACGCCGA CCCCGACCCC GACGCCTCAG
ACCGCCTCAG CCCTCGACCT CGTCCTCGCG CCGACCGGCT GA
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| Protein sequence | MSFESRTPSA PGAPRAPRTP RTPRPAGSPR LALAVIAASA LMAVLDGSIV TVAMPSIQSH
LGFSPAGLSW VVNGYQLAFG GLLLLAGRLG DLLGRKRVFL AGIALFLAAS AVAGAATSPA
MLVAARFAQG VGGAASSAVS LGILVTLFTE PRERAKALGV FAFTGAAGAS IGQVLGGVLT
DALSWHWIFL INIPIGLLTL AAAVRVIPTD RGQGLRAGVD VSGALLVTGG LMLAIYTVVG
TADHGWGSSR TLGLGALSVL LIAGFFVRQA TAANPLMPLR ILRSPGVAAA NVVQMLMIAA
MFAFQIIVAL YMQRVLGYDA TETGLAMLPA AVAIGGVALG VSARLIAKFG ARSVLITGLA
MLTGALALLL RMPTHANYVR DLLPTMLLIA GGGLAMPATA GLGMSGAREQ DAGLVSGLYN
TTQQVGAAIG AAVLSTLAAG RTAHLLRAGH SPAEALSSGY HAAFMIGVGL LAVALIVAVF
ALRDAPEQDA PTPTPTPTPQ TASALDLVLA PTG
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