Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8227 |
Symbol | |
ID | 8339606 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 9540319 |
End bp | 9540816 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644961313 |
Product | transcriptional regulator, XRE family |
Protein accession | YP_003118891 |
Protein GI | 256397327 |
COG category | [K] Transcription |
COG ID | [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.556785 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCCCA ACCCTCTGGG AGCCCTTCCC ATCGGACCGC TCGGCGAGTA CATCCGCGAG CAGCGCCGCA ATGCCGAGTA CTCCGTGCGG CAGCTGGCGC AGGCGGCGGG GGTGTCGAAT CCCTACCTCA GTCAGATCGA GCGGGGGTTG CGCAAGCCCA GTGCGGAGAT TCTGCAGCAG CTGGCCAAGG CGCTGCGGAT ATCGGCCGAG ACGCTGTATG TGCGAGCCGG GTTGCTGGAC GGCGGCGCCG ACGTCGATGA GGACGCGGCG ACCGACGGGC ACGGCGTGCG TTCCGCTGTG GCGGACGATC CCTGGCTCAA CGCGCGGCAG AAGCGCGCGC TGCTCGACAT CTATGAGGCG TTCCGTATCG AGAGCGCCCG GGATGCGGCG GCGAGCGCAC CGGACGACGA AGCCGCTAAT CCTGACAAGT CTGGCAAGTC TGACAAGACC GACGAGACCA TCCACGGCCC GGTGACGTCC GGGCCCACCG AGCAGTGA
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Protein sequence | MPPNPLGALP IGPLGEYIRE QRRNAEYSVR QLAQAAGVSN PYLSQIERGL RKPSAEILQQ LAKALRISAE TLYVRAGLLD GGADVDEDAA TDGHGVRSAV ADDPWLNARQ KRALLDIYEA FRIESARDAA ASAPDDEAAN PDKSGKSDKT DETIHGPVTS GPTEQ
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