Gene Caci_8207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8207 
Symbol 
ID8339586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9518247 
End bp9518732 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content71% 
IMG OID644961293 
ProductTadE family protein 
Protein accessionYP_003118871 
Protein GI256397307 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4961] Flp pilus assembly protein TadG 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.857445 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGACG GGGCGAGAGA GGACGGGACC ACGTCGCGCG GCGGACGATC GCTGCGCGAC 
GACCGCGGCA TGACCGCGAT CGAGTTCGTC GTCCTCACCC CGCTGTTGTT CCTGCTGTTG
ATGCTGACGG TGCAGTTCGC GCTGTACCTG TTCGCGAAAC AGGCCGCGAC CGCCGCGGTC
CAGGACGGCG CCCGCACGGC GCGCGAGGAA GCCGCGTCGA AGGGCTGCAC CGACACGACC
GGTACGTGGC AGCAGGACGC GGTGACCGCC GCGGTGGCCC GCGCACAGGC TCTCGGCGGA
CAGCTGATCC TCAAGCCGGC GGTGACGACC GGCTTCACGC TGGACCCGGA ACTGAACGCC
GACTGCAAGA TCTCGCTGGT CCGGGTGGAC CTGCACTCGG CGGTGCCCTC GGTCTTCCCC
GGGTGGACCC CGACGATCGA CGTGCACGCC GGCGGTCCGC TGGAGCAGCC GGTGAGGCAT
CCGTGA
 
Protein sequence
MTDGAREDGT TSRGGRSLRD DRGMTAIEFV VLTPLLFLLL MLTVQFALYL FAKQAATAAV 
QDGARTAREE AASKGCTDTT GTWQQDAVTA AVARAQALGG QLILKPAVTT GFTLDPELNA
DCKISLVRVD LHSAVPSVFP GWTPTIDVHA GGPLEQPVRH P