| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8176 |
|---|
| Symbol | |
|---|
| ID | 8339555 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 9482935 |
|---|
| End bp | 9485364 |
|---|
| Gene Length | 2430 bp |
|---|
| Protein Length | 809 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644961262 |
|---|
| Product | Dolichyl-phosphate beta-D-mannosyltransferase |
|---|
| Protein accession | YP_003118840 |
|---|
| Protein GI | 256397276 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCGGCG TCGCGGATCC GGGCGCTGCG CGCCGGCGGA GCCGAATAGG CGCGCTGCTC
TCGCGGCGCG TGGTGGAACC GGTATCGGTC GCCTTCGGGA CGGCCGTACT GTTGTTCGCC
CGGCTCATGC TCCCGGTGCC GGTCGGCGTG GCCGACAACT ACGACGGCAG CCGGCTGCTG
TGCCACCTGA GCCTGTACAC CACGGGCAGC TCCGACCAGA TGCGCGCCTG GGTCAACTTC
GCCTACGTGA CCAAGCCCGC GGGAACCTGG AACTGCACGA CCACGCCGTA CGGCAAGACG
AGCATCGACC TGCCGCAGCC GGCGTACAAC TCCAGCCAGC TGATCCTGAT GAACATCGCG
CACTACCTGA CCCAGGCGCT GGGGTTGACG CACAAGGGCG GACCCACCGC GCTGGACCTG
CGGGTGCTCG GCGCCGTCGG CTGCGTGTTC ATCGGCGCCG CGATCGGCCT GCTGTTCGCC
GTGCTGCGCA GCACGCGGCT GTTCCGCTAC CTGCTGTGCG GCGCGCTGGT CGCCGTCGTC
GCCGACGCCA GCTTCATCGA CTTCGCCGCC TCCCCGCTCA GCGAGATCTC GGCGGTCATC
GGCGTCCTCT TCCTGCTGCC GGCGATCCTG CTCCTGTTCC GGCCGGGCCG CTCCCGGTGG
TGGGGGCTGG CCCTGACCTT GGGCGCCGGG CTGTTCCTGG TCAGCTCCAA GGCGCAGATG
ATAGTGCTGG TGGCGCCGCT GATGCTGCTG GTGGCGGCCT TCCCGGTGGC CGTGGGCCCG
CTCAAGGGCC GCATCGGCGC CCGGGTGGTC CCGGTGGGTC TGGCCCTGGT GCTGGCCGGG
GGCAGCCTCG CGCTGACCCC TAAGCAGGAC CCGCACTTCA CGCTGCAGAC CAAGGCCGAC
TTCCTGTTCA ACGAACTGCT GTACGTGAGC CCGAACCCGC AGGCCGACAT GAAGTCGATG
GGCGTGCCGT TCTACTACAT CAGCCAGGTC GGCAAGCCCG CCTGGTGTGC GCCGTTCTCC
CCGAGCGTGA TGGACACCGG CACCTACGAC TCGAACGCCA AGAGCGACAA GTACGTCGCC
CGCGACCACT CGAACGACCC GGCGCTGCAG GCGGCCATGA AGACCGGCAA CACGTGGAAG
TTCATGCTGA CGCACCCGGA CCGCCTGGTC CGCGTCGCCA ATGACGCCGC GAACTCCTTC
TTCTATGTAC GCCCCACCTA CACCGGCTTG TGCGGCGGGA CGCACAAGGC CCAGGTCAAC
CCGCTGGGGA ACTACGCCAT CCCCAAGGGC AAGAACACCG TCGACAAGCG GTTCACCCCG
GTGACCAGCG TCCTCGACAC CTTCAAGGGC ATGGGCCTGA TCCCGCTGCT GCTGCTGTGG
GGCATCCCGA TCTGGATCGC CGTCCGGCTC CTGGCGCGCC GCAAGGTCCG CGCCGCCGGC
GAACGCAAGG CCCTGGCTTG GACGACGCTG TTCCTGTCGT CGGTCGCGCT GCTCCAGTTC
GGCGCCGGCG CCTACTTCGA CGGCATCGAC ACCTCGAAAC ACCTGAACCT GTCCATCTTC
GCCTCGGTCC TGGCCGTGGT GACCGCAGTG GCGACCGCCC GCCTGCGCCC CGAGACCGTG
GGCGCCGGCA CTGTCGGGAG CGTGCCCGAC GACCACACCC TGAGGAGCGA AACCGACGTG
GAGTCCGCAG CCAAGGCCCT GAGTGTCCTG GTGATCATCC CGACCTACAA CGAGTCGGAG
AACCTGGAGA AGATCGTCGC CCGCGTCCAC GCCGCGAACC CGGACGTGCA CGTACTCGTG
GCCGACGACA ACTCCCCGGA CGGGACCGGA AAGCTCGCCG ACAAGCTGGC CGCCGACGAC
GAGCGGGTCA AGGTCATGCA CCGGGCCGGC AAGGAGGGGC TGGGCAAGGC CTACCTGGCC
GGGTTCGCCT GGGGGATCGA GCACGAATAC GACGTCATCT GCGAGATGGA CGCCGACGGC
TCGCACCGCC CCGAGGACTT CCCGGCGCTG CTCAAGGCCC TGGTGGAGCA GAACGCCGAC
CTGGTGCTGG GCTCGCGCTA CGTCCCCGGC GGCAAGACCG TCGGCTGGCC CAAGCAGCGC
GAGATCCTGT CCAAGGGCGG CAACACCTGG GTCCGCCTGG TCACCGGCAT GAAGCTGGCC
GACGCCACCG GCGGCTACCG GCTCTTCCGC CGCGAGACGC TGGAGAAGAT CGGCCTGGAC
TCCGTCGCCA GCGCCGGTTA CACCTTCCAG GTCGACCTGG CATGGCGCAC GGTGCGGGCG
GGCCTGAAGG TGGTCGAGGT CCCGATCACC TTCGTCGAGC GCGAACTCGG GGCGTCGAAG
ATGAGCAAGA ACATAGTCGC CGAGGCCTTG TGGCGGACCA CGGTGTGGGG CACCACCTAC
CGGCTGAACC GGCTGATCGG CAAGAAGTAG
|
|---|
| Protein sequence | MAGVADPGAA RRRSRIGALL SRRVVEPVSV AFGTAVLLFA RLMLPVPVGV ADNYDGSRLL
CHLSLYTTGS SDQMRAWVNF AYVTKPAGTW NCTTTPYGKT SIDLPQPAYN SSQLILMNIA
HYLTQALGLT HKGGPTALDL RVLGAVGCVF IGAAIGLLFA VLRSTRLFRY LLCGALVAVV
ADASFIDFAA SPLSEISAVI GVLFLLPAIL LLFRPGRSRW WGLALTLGAG LFLVSSKAQM
IVLVAPLMLL VAAFPVAVGP LKGRIGARVV PVGLALVLAG GSLALTPKQD PHFTLQTKAD
FLFNELLYVS PNPQADMKSM GVPFYYISQV GKPAWCAPFS PSVMDTGTYD SNAKSDKYVA
RDHSNDPALQ AAMKTGNTWK FMLTHPDRLV RVANDAANSF FYVRPTYTGL CGGTHKAQVN
PLGNYAIPKG KNTVDKRFTP VTSVLDTFKG MGLIPLLLLW GIPIWIAVRL LARRKVRAAG
ERKALAWTTL FLSSVALLQF GAGAYFDGID TSKHLNLSIF ASVLAVVTAV ATARLRPETV
GAGTVGSVPD DHTLRSETDV ESAAKALSVL VIIPTYNESE NLEKIVARVH AANPDVHVLV
ADDNSPDGTG KLADKLAADD ERVKVMHRAG KEGLGKAYLA GFAWGIEHEY DVICEMDADG
SHRPEDFPAL LKALVEQNAD LVLGSRYVPG GKTVGWPKQR EILSKGGNTW VRLVTGMKLA
DATGGYRLFR RETLEKIGLD SVASAGYTFQ VDLAWRTVRA GLKVVEVPIT FVERELGASK
MSKNIVAEAL WRTTVWGTTY RLNRLIGKK
|
|---|
| |