Gene Caci_8118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8118 
Symbol 
ID8339496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9413076 
End bp9414092 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content72% 
IMG OID644961203 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_003118782 
Protein GI256397218 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0492] Thioredoxin reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCCC CGATCAGCAC TGATCAGCTC AACGAAAACG CGAACCAGAA CGAGAACCAC 
AGCGAGAACG AGAGCCAGAC TTACGACGTC GTCATCATCG GCGGCGGTGC CGCAGGCCTG
TCCGCCGCGC TGATGCTCGG CCGCGCACGC CGCCGGGTCC TCGTCGTCGA CGCCCGCGCG
CCGCGCAACG CCAACGCCGG CCACATGCAC GGCTACCTGT CGCGGGACGG CATGCCGCCG
CTGGAGCTGC TGGAGCACGG CCGCGACGAG GTGCTGTCCT ACGGCGGCGT GATCGTGACC
GACTTCGCGG AGAAGGCCGA GCGCACCGCG GAGGGATTCC ACGTCACGCT CGCCAGCGGC
TGCACCGCCA CCGGACGGCA GCTGCTGGTC GCCACCGGCC TGACCGACGT GCTGCCGGAC
ATCCCCGGCC TGGCCGAGCT GTGGGCGCGG GACGTGCACG TCTGCCCCTA CTGCGACGGC
TGGGAGGTCC GGGACGGCGC GCTGGCGACG GTCGCGACCG GACCGTTCTC GACGCACCAC
ACCCTGCTGC TCCGGCAGTG GAGCGCGGAC CTGGTGTACT TCCTCAACGG CCAGCCGCTC
GACGACGCCG ACCGCGCGAA GCTCACGGCG CGCGGGGTGC GCGTCGAGGA GCAGCCGCTG
CGGCGACTGG TCACGAGCGA GGGCCGGCTG AGCGCGCTGG AGCTGGCGGA CGGCACGCGC
GTCGAGCGCG AGACCGTGTT CCTGGTGCCG GCTTTCGAAG CCAACGGAAC GCTGCTGGAC
GCGCTCGGGT GCGAGAAGGA TCCGGAGACC GGCTGGGTCT CGACGGGAAT CGGCGGGCGC
ACGTCGGTCC CCGGCGTGTG GGCCGCGGGC AACGTCGCGG ACCCGACCAA CGGGGTCATC
GCGGCGGCCG GCGCGGCGAC GATGACCGCC GCGCAGATCA ACGCCGCGTT GGTGGAAGCG
GATGTGGCGG CGGACGTGGA AGCCATGAGG GCCGCCGCGA CCACCGATGT GCTTTGA
 
Protein sequence
MSSPISTDQL NENANQNENH SENESQTYDV VIIGGGAAGL SAALMLGRAR RRVLVVDARA 
PRNANAGHMH GYLSRDGMPP LELLEHGRDE VLSYGGVIVT DFAEKAERTA EGFHVTLASG
CTATGRQLLV ATGLTDVLPD IPGLAELWAR DVHVCPYCDG WEVRDGALAT VATGPFSTHH
TLLLRQWSAD LVYFLNGQPL DDADRAKLTA RGVRVEEQPL RRLVTSEGRL SALELADGTR
VERETVFLVP AFEANGTLLD ALGCEKDPET GWVSTGIGGR TSVPGVWAAG NVADPTNGVI
AAAGAATMTA AQINAALVEA DVAADVEAMR AAATTDVL