Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8115 |
Symbol | |
ID | 8339493 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 9410351 |
End bp | 9410617 |
Gene Length | 267 bp |
Protein Length | 88 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644961200 |
Product | Phosphotransferase system, phosphocarrier protein HPr |
Protein accession | YP_003118779 |
Protein GI | 256397215 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1925] Phosphotransferase system, HPr-related proteins |
TIGRFAM ID | [TIGR01003] Phosphotransferase System HPr (HPr) Family |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCAGC GCACCGTGAC CGTGGCCTCC AAGGTGGGGC TGCACGCCCG CCCCGCGGCG GTCTTCGTGA AGAAGGCCAG CGAGCTCCCG GTCCCGGTGA CCCTGGCTAA GGACGGCGGC AAGCCGGTGA ACGCCAAGTC GATGCTCGCG GTGATGTCCC TGGACGTGCG CGGCGGCGAG CGGGTCACGC TGGCCGCCGA CGGCGAGGGC GCGGCGGCGG CCGTGGACGA GCTGGCCGAG CTGCTGGAGA CCAACCTCGA TGGGTGA
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Protein sequence | MPQRTVTVAS KVGLHARPAA VFVKKASELP VPVTLAKDGG KPVNAKSMLA VMSLDVRGGE RVTLAADGEG AAAAVDELAE LLETNLDG
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