Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8107 |
Symbol | |
ID | 8339485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 9401925 |
End bp | 9403571 |
Gene Length | 1647 bp |
Protein Length | 548 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644961192 |
Product | helicase domain protein |
Protein accession | YP_003118771 |
Protein GI | 256397207 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1061] DNA or RNA helicases of superfamily II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCTGCC TGATCGTCCA GTCCGACAAG ACCCTCCTGC TCGAGATCGA CCACCCGCAG GCCGAGGAGT GCCGCCGGGA CATCGCCCCG TTCGCCGAGC TGGAGCGCTC GCCGGAGCAC ATCCACACCT ACCGCGTCAC GCCGCTGGCG CTGTGGAACG CGCGCGCCGC CGGCCACGAC GCCGAGCAGG TCATCGACGC GCTGCTGCGC CACACCCGCT ACCCGGTGCC GCACTCGCTG CTGGTCGACA TCGCCGACAC CATGGACCGC TACGGCCGCC TGCGGCTGCT GCAGCACCCG ACGCACGGCC TGGTCCTGGA GACCACCGAC GTCCCGGTGC TGGAGGAGGT GATCCGCCAC AAAAAGGTGC AGCCGCTGAT CGGCGCCCGG CTCGACGAGC ACACCATCAA GGTCCACCCC TCCGAGCGCG GGACCCTGAA GCAGGTGCTG CTGAAGGTCG GCTGGCCGGC CGAGGACCTG GCGGGCTACG TGGACGGCGA GCACCACGAC ATCGCCCTGC GCGAGGACGG CTGGACCCTG CGTCCGTACC AGAAGGACGC CGCCGAGGGC TTCCGCCACG GCGGCTCCGG CGTGATCGTG CTCCCCTGCG GCGCGGGCAA GACCATCGTC GGCGCGGCGG CCATGGCCGG GGTCGAGGCG ACGACGCTGA TCCTGGTCAC CAACACCGTC AGCGTCCACC AGTGGCGCAA GGAACTGCTC AAGCGCACCA CGCTGACCGA CGAGGAGATC GGCGAGTATT CGGGCGCCCG CAAGGAGATC CGCCCGGTCA CCATCGCCAC CTACCAGGTC CTCACGCGCA AGACGAAGGG CGTCTACGCC AACCTGGAGC TGTTCGACGC CCGCGACTGG GGACTGATCG TCTACGACGA GGTCCACCTG CTGCCGGCGC CGGTCTTCCG CTTCACCGCC GACATCCAGT CCCGCCGCCG CCTCGGACTG ACGGCCACCC TGGTCCGTGA AGACGGCTTG GAAGGCGAGG TCTTCTCGCT GATCGGTCCC AAGCGCTTCG ACGCCCCGTG GAAGGACATC GAGGCGCAGG GCTACATCGC CCCGGCGGAC TGCGTCGAGG TCCGCGTCAC CCTCACCGAC CACGAGCGCC TGCGCTACGC CAGCTCCGAG CCGGAGGAGA AGTACCGCAT CGCCTCGACC ACGGCGACCA AGTCCACGCT CGTGGAAGCC CTGGTGAAGA AGCACGCCGG CGAGCCCACC CTGGTCATCG GCCAGTACCT GGAGCAGCTG GACGACCTCG GCGCGCGGCT GAACGCCCCG GTCCTGAAGG GCAGCACCAC GGTGAAGGAG CGCGAGCGCC TGTACGAGGG CTTCCGCACC GGCGAGATCC CCACCCTGGT GGTCTCGAAG GTCGCGAACT TCTCCGTCGA CCTGCCCGAG GCGAGCGTGG CGATCCAGGT GTCCGGCACG TTCGGCTCCC GCCAGGAGGA GGCGCAGCGG CTGGGACGCG TGCTGCGCCC GAAGGCCGAC GGCCGCGGCG CGCGCTTCTA CGCCGTGGTC TCCCGCGACA CCGTGGACCA GGAGTACGCG GCGCACCGGC AGCGGTTCCT TGCGGAGCAG GGGTACGCAT ACCGGATCGC CGACGCCGAC GACGTGTTCG CCGGCAAGGA CATCTAA
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Protein sequence | MTCLIVQSDK TLLLEIDHPQ AEECRRDIAP FAELERSPEH IHTYRVTPLA LWNARAAGHD AEQVIDALLR HTRYPVPHSL LVDIADTMDR YGRLRLLQHP THGLVLETTD VPVLEEVIRH KKVQPLIGAR LDEHTIKVHP SERGTLKQVL LKVGWPAEDL AGYVDGEHHD IALREDGWTL RPYQKDAAEG FRHGGSGVIV LPCGAGKTIV GAAAMAGVEA TTLILVTNTV SVHQWRKELL KRTTLTDEEI GEYSGARKEI RPVTIATYQV LTRKTKGVYA NLELFDARDW GLIVYDEVHL LPAPVFRFTA DIQSRRRLGL TATLVREDGL EGEVFSLIGP KRFDAPWKDI EAQGYIAPAD CVEVRVTLTD HERLRYASSE PEEKYRIAST TATKSTLVEA LVKKHAGEPT LVIGQYLEQL DDLGARLNAP VLKGSTTVKE RERLYEGFRT GEIPTLVVSK VANFSVDLPE ASVAIQVSGT FGSRQEEAQR LGRVLRPKAD GRGARFYAVV SRDTVDQEYA AHRQRFLAEQ GYAYRIADAD DVFAGKDI
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