Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8105 |
Symbol | |
ID | 8339483 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 9398454 |
End bp | 9399971 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644961190 |
Product | Beta-N-acetylhexosaminidase |
Protein accession | YP_003118769 |
Protein GI | 256397205 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3525] N-acetyl-beta-hexosaminidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGCGC CCAAGATCTC GATCATCCCC AAACCGCTGC GGATACAAGC CGGATCCGGT CGGCTCACGT TCGACTCCGC AACCGTCGTG AACGCCTCGA ACGGGCATCC CGAACTCGGC CCGGAGGGCT ACACGCTGGT CATCGACGAC GACGGCATCA CCTTCGTCAC CGGCACCGAG ACCGGCCAGT TCTACGCCGA GCAGACGCTG AAGCAGCTCC TGCCGCCCGA CGCGCTGCGC TCCGACGCCG GCGACAAGGC CTGGCCGCTG CCCTACGTGA CGATCACCGA CGCCCCGCGC TTCCGCTGGC GCGGCGCGAT GCTCGACGTG GCACGCCACT TCCTGCCCAA GCGCGACGTG CTGCGCTTCC TGGACCTGAT GGCGCTGCAC AAGCTGAACG TCCTGCACTT CCACCTGACC GAGGACCAGG GCTGGCGCAT CGAGATCAAG CAGTATCCGA AGCTCACCGA GGTCGGCGGC TGGCGCCGGG AGACGGTCGG CGACGGCCGC CCGCACGGCG GCTTCTACAC GCAGGACGAC ATCCGCGAGA TCGTCGCCTA CGCCACCGAG CGGCACATCA CCGTGGTCCC CGAGATCGAC ATCCCCGGGC ACTCCACCGC CGCCATCGCC GCCTACCCCG AGCTGGGCAA CCAGGACGTG CCCAGCGCCG AGGAACCGCG CGAGGTGTGG ACCCGGTTCG GGATCGCCAC CTCGGTGCTG AACGTCGAGG ACACGACCGT CGAGTTCTAC AAGACGGTGA TGGACGAGAT CTGCGACCTG TTCCCCGGCG AGTTCGTCTG CCTCGGCGGC GACGAGTGCC CGAAGGACGA GTGGAAAGCC AGCGCCCGGG CCCAGGCCCG CAAGGCGGAA CTGGGACTGG CGACCGAAGA GGATCTGCAG GCCTGGTTCA TGAACCAGCT CAGCGAGCAC GTCGCGTCGA AGGGACGCAA GCTGCTCGGC TGGGACGAGA TCCTGGAAGG CGAACTGTTC CCGGGCACCG TCGTGTCCTC CTGGCGCGGC ACCGACGGCG CGGTCGAGGC GGCACGGCGC GGACACGACA CCCTCACCAG CCCCTACGGC TGGGTCTACT TCGACTACCG CCAGTCCGAC GAGGAAGGCG AGCCGGGCGC CCCCTGGGCC GCGCCGACCT CGCTGGAGCG CGCCTACAGC TTCGAGCCGA TCCCCGAGGA CATGCCCGAA GAACTCGCCG ACCACGTCAT CGGCTCCGAG GCCACCCTCT GGAGCGAGTA CATCCCCGAC GCCCGGGTCC ACGACTACCA GGCCTGGCCC CGCCTCGCAG CCTTCAGCGA AACAGTGTGG TCCACCCCCG ACCGCGACTT CGCGGAGTTC CAGTCGCGCC TGGAGAAGCA CCTGGAGCGC CTCGACGCAC TCGGAGTGGA GTACCGCCCC CTCGACGGTC CGCATCCATG GCAGAAGCAG CCGGCGCCGC ACTGGAAGGC CGACCCGAAC GAGGCCGAGG CGGCTGACGG CACGGAAAGC ACCGAGAGCA CGGAGTAG
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Protein sequence | MDAPKISIIP KPLRIQAGSG RLTFDSATVV NASNGHPELG PEGYTLVIDD DGITFVTGTE TGQFYAEQTL KQLLPPDALR SDAGDKAWPL PYVTITDAPR FRWRGAMLDV ARHFLPKRDV LRFLDLMALH KLNVLHFHLT EDQGWRIEIK QYPKLTEVGG WRRETVGDGR PHGGFYTQDD IREIVAYATE RHITVVPEID IPGHSTAAIA AYPELGNQDV PSAEEPREVW TRFGIATSVL NVEDTTVEFY KTVMDEICDL FPGEFVCLGG DECPKDEWKA SARAQARKAE LGLATEEDLQ AWFMNQLSEH VASKGRKLLG WDEILEGELF PGTVVSSWRG TDGAVEAARR GHDTLTSPYG WVYFDYRQSD EEGEPGAPWA APTSLERAYS FEPIPEDMPE ELADHVIGSE ATLWSEYIPD ARVHDYQAWP RLAAFSETVW STPDRDFAEF QSRLEKHLER LDALGVEYRP LDGPHPWQKQ PAPHWKADPN EAEAADGTES TESTE
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