| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8103 |
|---|
| Symbol | |
|---|
| ID | 8339481 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 9397080 |
|---|
| End bp | 9397751 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644961188 |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | YP_003118767 |
|---|
| Protein GI | 256397203 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCGA CCGCCACGAC CGCGACCGCC GACGAGCCGC AGGGCAACCC GAGAAAGCGC
CGGGCGATCC TGGACGCCGC CGGCACGGTG TTCCTGCGCG AGGGCTTCAC CCGCGCCAGC
ATCGACGCGA TCGCGGCCGA GGCGAAGGTC TCCAAGCAGA CCGTCTACAA CCACTTCGGC
GACAAAGAGC GCCTGTTCAT GGCGATGACG GACGACGTGC AGGACCGCAC GGTCGCGCAC
GTCGTGGAGC TGATGGACCG CGACTTCCCC GACGCCTCGA AGCTGACCGG CCCGGAAGAC
CTGCGCGCCG CGCTCCTGCA GCTGACCGGC GCCTGGGTCC GCGTCGTCTA CACCGGACCG
CTGGTCGACC TGCGTAAGCT CGTCGACGCC GAGTCCGAGC ACCACCCCGA CCTCCAGCAG
CGCTGGTTCA CCAACGGCCC GGGGCGCACC ATGCCGCGGC TGAACAAGCT GCTGTCCGCG
CTGGCCCGCG CCGGGCTGCT CGACGTGCCC GCCGAGGTGC TGGCCGTGCC GGAGTTGCTG
GCGCACCAGC TGACCACGAC CGCCGGATCG GACGTCCGGA GGATCGCGCA CGAAGCGGAC
TTCGACGCCG AGTTCGACCG GCGGATCGCG CAGGGCGTGG ACTTCTTCCT CAGGGCTTAC
GCGCCACGCT GA
|
|---|
| Protein sequence | MTATATTATA DEPQGNPRKR RAILDAAGTV FLREGFTRAS IDAIAAEAKV SKQTVYNHFG
DKERLFMAMT DDVQDRTVAH VVELMDRDFP DASKLTGPED LRAALLQLTG AWVRVVYTGP
LVDLRKLVDA ESEHHPDLQQ RWFTNGPGRT MPRLNKLLSA LARAGLLDVP AEVLAVPELL
AHQLTTTAGS DVRRIAHEAD FDAEFDRRIA QGVDFFLRAY APR
|
|---|
| |