| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8072 |
|---|
| Symbol | ubiA |
|---|
| ID | 8339450 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 9365228 |
|---|
| End bp | 9366175 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644961157 |
|---|
| Product | prenyltransferase |
|---|
| Protein accession | YP_003118736 |
|---|
| Protein GI | 256397172 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
|---|
| TIGRFAM ID | [TIGR01475] putative 4-hydroxybenzoate polyprenyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCACGG CTCCTGTGGA ACCCACCGGC ACCACCCGCG AGGTCAACGC GGCTCCCGAG
ACCGCGCGGG GCGTGGCCGG CGGGACCCGG GCGTTCCTGC GCCTGGTCCT GATCGAGCAC
TCGGTGTTCG CCCTGCCCTT CGCCTACATC AGCGCGCTGT GGGCGATGTT CGAGACCAGC
GGCCACGTGA ACTGGGCCAA GCTGGCGCTG ATCACCGTCG CCATGGTCGG CGCCCGCACC
TTCGCGATGG CGATGAACCG CATCATCGAC CGCGAGATCG ACGCCCGGAA CCCGCGCACG
CAGATGCGCG AGCTGGTCAC CGGCGCGGTC TCGGTGAAGA CCGCCTACCT CGGCTCCCTC
GCCGCGCTGG TCGTGTTCCT GGCCGCCGCG GCGTCCCTGA ACCGGCTCTC GCTGTTCCTG
GCGCCGGTCG CCGTGGTCCC GCTGGTCCTG TACCCCTACG GCAAGCGCTT CACGAATTAC
CCGCACGCCA TCCTCGGCAT CGCGCAGGCG ATCGGCCCGA TGGGCGCCTG GATCGGCGTG
ACGGGCCACT GGTCGTGGCA GGCGACGCTG CTGGGCCTGG CGGTCGGCTT CTGGATCGGC
GGCTTCGACC TGATCTTCGC CTGCCAGGAC GTCGCCGCCG ACCGCGTGAT CGGCGTGAAG
TCGGTCCCGG CCCGCTTCGG CATCGCCGCC TCCCTGCGCG CCTCCATCGT CACGCACGTC
ATCACCCTCG CCCTGCTGGT CTGGTTCGGC GTGGTGGCGC ACGGCGGCGC CCTGTGGTGG
ATCGGCGTCG CGGTGGTCGC CGGCGCCTTC TGGTACGAGC ACTCCCTGGT CAAGCCCACC
GACCTGTCGA AGGTGAACCG GGCGTTCTTC ACCACGAACG GCTTCGTGGG GATCTCGCTG
TTCTGCTTCG CGCTGCTGGA CCTGATCGTG CGCGGGTTGG GCGCCTGA
|
|---|
| Protein sequence | MSTAPVEPTG TTREVNAAPE TARGVAGGTR AFLRLVLIEH SVFALPFAYI SALWAMFETS
GHVNWAKLAL ITVAMVGART FAMAMNRIID REIDARNPRT QMRELVTGAV SVKTAYLGSL
AALVVFLAAA ASLNRLSLFL APVAVVPLVL YPYGKRFTNY PHAILGIAQA IGPMGAWIGV
TGHWSWQATL LGLAVGFWIG GFDLIFACQD VAADRVIGVK SVPARFGIAA SLRASIVTHV
ITLALLVWFG VVAHGGALWW IGVAVVAGAF WYEHSLVKPT DLSKVNRAFF TTNGFVGISL
FCFALLDLIV RGLGA
|
|---|
| |