| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8066 |
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| Symbol | |
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| ID | 8339444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 9360567 |
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| End bp | 9361727 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644961151 |
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| Product | Radical SAM domain protein |
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| Protein accession | YP_003118730 |
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| Protein GI | 256397166 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
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| TIGRFAM ID | [TIGR00423] radical SAM domain protein, CofH subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.437454 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTCCG GGCTCAAGCG GGATCTCGAG GACAAGGTCC TCTCCGGCTC GCGGCTTTCC
TTCGAGGACG GCGTGGCGCT GTACGACACC GATGAGGTGG CCTGGCTCGG CGAACTCGCC
CACGAGATGC GGACCCGCAA AAACGGCGAC AAGGTCTTCT TCAACGTCAA CCGCCACCTG
AACATGACGA ACGTCTGTTC GGCGTCGTGC GCGTACTGCT CCTTCCAGCG CAAGCCGGGG
GAGAAGGACG CCTACACGAT GCGCATTGAG GAAGCGGTCC GCCTGGCCAA GGACATGGAG
CCGGACGGCA TCACCGAGCT GCACATCGTC AACGGCCTGC ACCCGACGCT GCCGTGGCGC
TACTACCCGA AGTCGATCAG CGAGCTCAAG GCGGTGCTGC CCGGCGTCTC GATCAAGGCC
TTCACCGCCA CCGAGATCCA CTGGTTCGAG AAGATCTCCG GCCTGAGCGC GGAGGAGATC
CTCGACGAGC TGATCGAGGC CGGTCTGGAG TCCCTGACCG GCGGCGGCGC CGAGATCTTC
GACTGGGAGA TCCGCTCGCA GATCGTGGAC CACGCCACCC ACTGGGAGGA CTGGTCCCGC
ATCCACCGCC TCGCGCATGC CAAGGGCCTG CGCACCCCGG CCACCATGCT CTACGGCCAC
ATCGAGGAGC CCCGGCACCG CGTGGACCAC GTGCTCCGGC TGCGCGAGCT CCAGGACGAG
ACCGGCGGCT TCGCCGTCTT CATCCCCCTG CGCTTCCAGC ACGACTTCCA CGACAGCAAG
GACGGCAAGG TCCGCAACCG CCTCATGAAC CAGCCGATGG CCACCGGCGT CGAGGCACTG
AAGACCTTCG CCGTCTCCCG CCTGATGCTC GACAACTTCG ACCACGTGAA GTGCTTCTGG
GTCATGCACG GCCTGTCCAC CGCCCAGCTC GCGCTCAACT ACGGCGCCGA CGACCTGGAC
GGCTCGGTGG TCGAGTACAA GATCACCCAC GACGCCGACG ACTACGGCAC CCCGAACAAG
ATGACCCGCG AAGACCTCCT CGAGCTGATC CGCGACGCCG GCTTCACCCC GGTCGAGCGC
AACACCCGCT ACGAGATCAT CCGCGAGTAC GACGGCCCGG AGCCGGCCCG CCGCGAAGAG
CCGCAGCTGA TGACCTTCTG A
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| Protein sequence | MDSGLKRDLE DKVLSGSRLS FEDGVALYDT DEVAWLGELA HEMRTRKNGD KVFFNVNRHL
NMTNVCSASC AYCSFQRKPG EKDAYTMRIE EAVRLAKDME PDGITELHIV NGLHPTLPWR
YYPKSISELK AVLPGVSIKA FTATEIHWFE KISGLSAEEI LDELIEAGLE SLTGGGAEIF
DWEIRSQIVD HATHWEDWSR IHRLAHAKGL RTPATMLYGH IEEPRHRVDH VLRLRELQDE
TGGFAVFIPL RFQHDFHDSK DGKVRNRLMN QPMATGVEAL KTFAVSRLML DNFDHVKCFW
VMHGLSTAQL ALNYGADDLD GSVVEYKITH DADDYGTPNK MTREDLLELI RDAGFTPVER
NTRYEIIREY DGPEPARREE PQLMTF
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