Gene Caci_8054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8054 
Symbol 
ID8339432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9347537 
End bp9349123 
Gene Length1587 bp 
Protein Length528 aa 
Translation table11 
GC content68% 
IMG OID644961139 
Producthypothetical protein 
Protein accessionYP_003118718 
Protein GI256397154 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGTTC TGGCCTCGGC CGCGGCGTGC TCGGGGGGCG GCTCGAAGCA TTCGGGCCCG 
AATACCGGCG GCGGCACGGA CGTGTCCCAG AGTGGTGCTG CACCAGTTGC TTCTGGCGGT
GCTCCTACTG GGGATCCCGC TGGGGCTTTG AACATTGCGG CGGAGAACGC ACAGCCCGGA
ACCCCTAACT GGAACAAAGG CATCGACTCC GGCAGCGATC ATGGGATCGA GGGGTATGAC
GACCAGGTCG CGGTGACGCC GGGGCAGAGC TTCAAACTGT TTGTGAGCAC CACCGCGCCG
CAGTTCACGG CCACAGCTTT CCGGATCGGG TACTACGGCG GGACACAGGC TCGGCAGGTG
TGGAAGTCCG CGGTGACGCC GGGGAAGGCG CAGCCGGCGG CGACCGTGCG GGCGCAGGTG
AACACGGTGA GCACGACGTG GCAGCCGTCG ATGACGGTCG CCACGGACGG ATGGCCGGAG
GGTTCATACC TGATACGCCT GGACGCCGTT GGGGGGAAGG TGAAGGGCGC GCGGTTCGTG
CCGGTCACCG TGAGGTCAAC CTCGACCGCC GGCAAGGTGG TGCTGATCAA CGGCGTCACC
ACCTGGCAGG CGTACAACTC CTACGGCGGG TACGACCTCT ACAGCGGCGG AGCGCGGAAC
TCCTATGGGG ATCGCGCGCG GATCGTGTCC TTCGACCGGC CCTATGACAC GACCGGGGCG
GACCGGTTCC AGACCTACGA GCAGTCCTCG ATCGTCTTCT CCGAGAAGCT GGCCGCGAGC
CACGGCTTCG AGCTCGCCTA TGCTACCGAC CTCGACCTGC ACGAGCACCC CGGCATGTTC
CAGGGCGCGC GGGCCATTAT CACGCTCGGC CACGACGAGT ACTGGTCGAC GCAGATGCGC
CAGACCGTGA CCCAGGCACG AGACTCCGGA ACCAACCTCG CCTTCCTCGG CGCGAACGCG
GTCTTCCGCC ACATCCGCTT CCAGGACTCG CCGCTGGGCA AGGACCGCAT CCAGGTGGAC
TACAAGGACG CCGCCGAGGA CCCGATGCAC GTGACCGACC CGGCGGAGTC GACGCAGGAC
TGGCGCTACC CGCCGAACCC GCGCCCGGAG AACGTCCTGA CCGGCGTGTT CTACGAATGC
AACCCGGCCA ACGCGAACAT GGTGGTCTTC GACCCCGACT CCTGGCTGAT GGCCGGCACC
GGCGCCAAAG CGGGGCAGTC CTTCAAGGGA CTGGTCGGCA TCGAATACGA CCGAGTCGCC
GCCGACTCGA CCACCCCGCA CCCGATCGAG GCACTGACCC ACTCCCCGAT CACCTGCCAG
GGCAAGGCCT CGTACTCGGA CTCGGCGTAC TACACAGTCC CCTCCGGAGC GGGCGTCTTC
GCCACCGGCA CGATGCGCTG GAACTGCGCC CTCGTCAGCG GCGGCTGCAC CGACCAGATG
AACGCCGCAG CCCACACCTT CGCCCAGCAG GTGACCACCA ACATGCTCCT CGCCTTCGCC
GCCGGGCCCG CCGGCAAGAC CCACCCCGCG ACGGACAACA CCGCGCGGCT GAAGCCCACG
CCGAGCTGGG GCGGGGTGGC GCCTTAG
 
Protein sequence
MLVLASAAAC SGGGSKHSGP NTGGGTDVSQ SGAAPVASGG APTGDPAGAL NIAAENAQPG 
TPNWNKGIDS GSDHGIEGYD DQVAVTPGQS FKLFVSTTAP QFTATAFRIG YYGGTQARQV
WKSAVTPGKA QPAATVRAQV NTVSTTWQPS MTVATDGWPE GSYLIRLDAV GGKVKGARFV
PVTVRSTSTA GKVVLINGVT TWQAYNSYGG YDLYSGGARN SYGDRARIVS FDRPYDTTGA
DRFQTYEQSS IVFSEKLAAS HGFELAYATD LDLHEHPGMF QGARAIITLG HDEYWSTQMR
QTVTQARDSG TNLAFLGANA VFRHIRFQDS PLGKDRIQVD YKDAAEDPMH VTDPAESTQD
WRYPPNPRPE NVLTGVFYEC NPANANMVVF DPDSWLMAGT GAKAGQSFKG LVGIEYDRVA
ADSTTPHPIE ALTHSPITCQ GKASYSDSAY YTVPSGAGVF ATGTMRWNCA LVSGGCTDQM
NAAAHTFAQQ VTTNMLLAFA AGPAGKTHPA TDNTARLKPT PSWGGVAP