| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8053 |
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| Symbol | |
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| ID | 8339431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 9345900 |
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| End bp | 9347171 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644961138 |
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| Product | geranylgeranyl reductase |
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| Protein accession | YP_003118717 |
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| Protein GI | 256397153 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
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| TIGRFAM ID | [TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.661392 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCTCGG AGAACGTCGC CGACGTCATC GTGGTCGGGG CCGGGCCCTC GGGCTCGGCG
ACGGCCCACC ATCTGGCCAC CGCCGGCTTG GACGTCCTGC TGCTGGAGAA GTCCCAGTTC
CCGCGGGAGA AGGTGTGCGG CGACGGCCTG ACGCCGCGCG CGGTGAAGTC GCTGGTGCGG
ATGGGCGTCG ACACCTCCGA GGAGGCCGGC TGGCTGCACA ACAAGGGCCT GCGGATCATC
GGCGGCGGCA TGCGGCTGGA GATGCCGTGG CCGGAGCTGG CGGCGTACCC GAACTACGGG
CTGGTGCGCC CCCGCGCCGA CTTCGACCAG ATCCTGGCGC GCCAGGCGGA GAAGTCCGGC
GCCCGGCTGC ACGAGAACAC GAACGTCACC GGTCCGGTGG TGGACCCGCG CAGCAACCGG
GTGATCGGCG TGACCGCGCG CATCACCGAC GCCGACGGCG GCAAGCGCGA GACCTCCTTC
CGCGCGCCGC TCATCGTCGC CGCCGACGGT AACTCCACCC GGCTGTCCAT CGCGCTGGGT
CTGCACAAGC GCGACGACCG CCCGATGGGT GTCGCCTATC GCACCTACTA CAAGTCGCCG
CGCACCAACG ACGACTACCT CGAGTCCTGG CTCGAGCTCT GGGACGGCGA GCGCCTCCTG
CCCGGCTACG GCTGGGTCTT CGGCATGGGC GACGGCACCT CCAACGTGGG CCTGGGCATC
CTGAACACCA CCAAGTCCTT CCGCAACGTG AAGTACCCGG ACCTGCTGCG CGCCTGGCTG
AAGAACACCC CCGACGAGTG GGGCTTCAAC GAGGAGAACC GCACCGAGCC GATCCGCGGC
GCCGCGCTGC CGATGGGCTT CAACCGCCAG CCGCATTACA CCCGCGGCGT GCTGCTCGTC
GGCGACGCCG GCGGCATGGT GAACCCCTTC AACGGCGAGG GCATCGCCTA CGCGATGGAG
TCCGGCGAGC TCGCCGCGGA CGTCATCGCG CAGGCGCTGG CGCGTCCGGC GGGCCCGGAG
CGGGAGCTGG CGCTGTCGGC GTACCCGCGC GTGCTGAAGG AGACCTATGG CGGCTACTAC
ACGATGGGCC GCCTGTTCGT CAGCCTGATC GGCAACCCGA AGGTGATGCG CCTGGCGACC
CAGCGCGGCC TGTCGCACCC GATGCTGATG CGCTTCACGC TGAAGATGCT CGCCAACCTC
ACCGACCCCA AGGGCGGCGA CGCGATGGAC CGCATCATCA ACGCGATGGC GAAGATCGCC
CCCGACGCCT GA
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| Protein sequence | MPSENVADVI VVGAGPSGSA TAHHLATAGL DVLLLEKSQF PREKVCGDGL TPRAVKSLVR
MGVDTSEEAG WLHNKGLRII GGGMRLEMPW PELAAYPNYG LVRPRADFDQ ILARQAEKSG
ARLHENTNVT GPVVDPRSNR VIGVTARITD ADGGKRETSF RAPLIVAADG NSTRLSIALG
LHKRDDRPMG VAYRTYYKSP RTNDDYLESW LELWDGERLL PGYGWVFGMG DGTSNVGLGI
LNTTKSFRNV KYPDLLRAWL KNTPDEWGFN EENRTEPIRG AALPMGFNRQ PHYTRGVLLV
GDAGGMVNPF NGEGIAYAME SGELAADVIA QALARPAGPE RELALSAYPR VLKETYGGYY
TMGRLFVSLI GNPKVMRLAT QRGLSHPMLM RFTLKMLANL TDPKGGDAMD RIINAMAKIA
PDA
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