Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8041 |
Symbol | ddl |
ID | 8339419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 9333257 |
End bp | 9334441 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644961126 |
Product | D-alanyl-alanine synthetase A |
Protein accession | YP_003118705 |
Protein GI | 256397141 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTCAGTC CCATGAGCGA TCAGAAGCGG ATCCGGGTGG CCGTCGTGTT CGGCGGACGC TCCAGTGAGC ACGCCATCTC CTGTGTCACC GCCGGTTCCG TGCTGGACGC CCTGCGCAAC GGGCCCGAGC CGCAGCGCTA CGAGATCGTG CCGATCGGCA TCGCCTCCGA CGGCCGCTGG GTGCTCGCCG ACCTGCCCGA CGGCGGCGAT CTGAACCTCG CCATCACCGA CGGCCGGCTG CCGGAGATCG GGCTGCCCGC CTCCGCCGAG CGCGCGAACC TGGTCACCAT GGCCGGCGAC CCGACCGCCC GCGAGCTGAC CGTGCACGAG CCGGGCGCGG TGCCCAAGTC GCTCGGCGAG GTGGACGTCG TGCTGCCGCT GCTGCACGGT CCCTACGGCG AGGACGGCAC GCTGCAGGGT CTGCTGGAGC TCGCCGGCGT CCCCTACGTC GGCTCCGGCG TCCTTGCCTC CGCGGTCTCC ATGGACAAGG AGTTCATGAA GCGGCTGCTG GCCCAGGCCG GGTTCGAGGT CGGCCCGTAC GAGGTCGTGC GCCCCCGGGA CTGGGGCACC GAGGAGGGCC GGGCCGCGGT GCGGCTGGCC GTGGAAGAGC TCGGATACCC GGTGTTCGTC AAGCCGGCGC GGGCCGGCTC CTCGATGGGC ATCACCAAGG TGGACGCGCC CGAGGAGTTG GACCAGGCGA TCGACGCCGC CCGCCGCCAC GACCCGAAGG TCTTGGTGGA GGCCGCGATC GAGGGCCGGG AGATCGAGTG CGGGGTGCTG GAGGGCGCCG GTCCGCAGGA TCCGGCCGAA GCCTCGCTGC CCGCCGAGCT GCGGGTCACC GGACCGCACG CGTTCTACGA CTTCCAGGCC AAGTACCTCG ACGGCAGCAC CGAGGTGGAC ATCCCGGCGC GGCTGAGCGC CGAGGAGATC GAGGACATCC GCGGCCAGGC GGTCGGCGTC TTCGAGACGC TGGGCTGCGA GGGTCTGGCG CGCGTCGACT TCTTCTACCA GGAGTCGGCC GACGGCGGTC CGGGGCGGTT CATCGTCAAC GAGATCAACA CCATGCCGGG CTTCACGCCG ACCTCGATGT TCCCGCAGAT GTGGCAGGCC GCCGGGCTGT CCTACCCGGA GCTGATCGCC CGGCTGATCG ACACCGCGCT GCTGCGGCCC GCCGGGCTGC GCTGA
|
Protein sequence | MVSPMSDQKR IRVAVVFGGR SSEHAISCVT AGSVLDALRN GPEPQRYEIV PIGIASDGRW VLADLPDGGD LNLAITDGRL PEIGLPASAE RANLVTMAGD PTARELTVHE PGAVPKSLGE VDVVLPLLHG PYGEDGTLQG LLELAGVPYV GSGVLASAVS MDKEFMKRLL AQAGFEVGPY EVVRPRDWGT EEGRAAVRLA VEELGYPVFV KPARAGSSMG ITKVDAPEEL DQAIDAARRH DPKVLVEAAI EGREIECGVL EGAGPQDPAE ASLPAELRVT GPHAFYDFQA KYLDGSTEVD IPARLSAEEI EDIRGQAVGV FETLGCEGLA RVDFFYQESA DGGPGRFIVN EINTMPGFTP TSMFPQMWQA AGLSYPELIA RLIDTALLRP AGLR
|
| |