Gene Caci_8021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8021 
Symbol 
ID8339399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9312479 
End bp9314494 
Gene Length2016 bp 
Protein Length671 aa 
Translation table11 
GC content70% 
IMG OID644961106 
Producthypothetical protein 
Protein accessionYP_003118685 
Protein GI256397121 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.555479 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCCTC CCGTCAAACT CCGCGCCGCC TTGCTGGCGT TCGCCGCGGC CTTGTTCAGC 
GTGCCGTCGG CGCCGGCCCG CGCTGACACG TTCGCCGCCT CTCCGAGCAT CGTCCAAGTC
GTCGCGCACG CCGACGACAC CTTCCTCTTC TTCAATCCAG ACCTGCGCAA GGTCTACGAC
TTCCCGCTGG TCACGGTGTT CCTCACGGCC GGCGCGGCGA CCACCGAGGT CGGGCCGAAC
CAGGCCTTCT CCAGCACCTG CCTGTACGGC CAGAGCCGCG ACAAGGGCGC GCGGGCCGCC
GCCGCCGAGA TCGCCGGCGT GCGGAACCCG ACGTGGACCC GGACCCCGAT CACCTTCGCC
GGCAAGGTCG CGGAGGAGGA CACCCTCGAC CAGGCGCCGC AGGTGAAGCT GGTCTTCTTC
AAGCTGCACG ACGCCGGGGA CGCCAACTAC GTCAGCGGCG TGAACAAGCA GGGCATCCTG
GAGCAGATCT ACAACTCCGG CCAGATCACC GGCTGGCACC AGGCCACCAT GGGCACCCTG
GCGGCCGACG GCGGCTCGGA CTGCGAGCAG CAGTACGCGA ACCAGACGTA CACGAAGTCC
CAGCTGACCG CCTCGCTGAC GGCACTCTAC GCGCACTACA ACGCGACCGT CGTCTACGGC
ATGGACCCGC ACCGCTTCGA CAGCGACCCG GGCAACACCG ACCACCTCGG CGCCGGCGGC
TTCACCCTGG ACTCCGTCGC GGCGTACCAC GGCCCGGGCA GCGGCGGGCA CGTCCTGCTG
CGGCCCTACC GCGACTACAA CATCAGCAAA GAGGGATCCA CCCTCAACGG CGGCGACAGC
GCGACCAAGA ACGGCGACTT CATCAGCTAC CTCGGTCCGG ACCGCGGCGA CATCCCCGGG
GTCTACCACG GCTTGTACGA CACGTCGCCG GACCCGAACA ACAGCTTCTA CACGCCCTTC
TACAGCCGCC AGTACTCGCG GTGGCCGAAC GGCGAGGTGT GGACGGCGCT GGACGGGACC
GGCAAGCTCA ACGCCTTCGC CATCCTCAAC AGCCAGGTCC AGCAGTGGAT CGAGACGACC
CCGGGCGGCG CCTGGACCGG TCCGACGCCG ATCCCCAACA GCTCCGGACT CACCCCGACG
CTCTCGGTGA TCCGCGATCC CTCGGGCATG CTGCGGGTGT TCACGACCCG GCTGTCGGAC
TACTCCGCGA TGACGGACGT CGAGACCGCG CCGGGCGTCT GGAGCGCCTG GAAGTCGCTG
GGCAGCGCGA ACCCCGACGA CCCGACGCTG CAAGGCGACC CGGCCGCGCT CACCGAGCAG
AACGGCAACG TGACGGTGTT CGTCCGCAAC CTCGGCACCG GGGTCAGCGC CAAGACCCTG
AATCCGGGCG GCAGCTGGCC CAGCACATGG GCCGACCTCG GCGGCTTCGA CGTCCGCGAC
GACCTCGCGG CGGGCCTCGG CGGCAGCGGC GCCGGCGAGC TGTTCGCCCC GTCCGGACAA
GGCATCCTGC ACTGGAAGCA GAACACGGCG CGCCGGTGGG CGATGGACTC CTCGCCGCTG
ACCCCGGCGG CGGCCGGCAA GACCCAGGTC TCCTTCGCGC TCAACAAGGA CGGCCGGCCG
GAGATCTTCT ACGCCGATCC GAACAACCCG AGCGTCGCGA CCCAGTGGAC GCAGGGCAAC
GGCACCTGGA CCCGCTCGCC CGGGCTGATC GGCGGCAGCC CGCCGATGCT GGAGAGCGTC
GCGGCCACGA CCGCGCCGGA CGGCCGGATC AGCATCGCGA TCCGCAACTC CGGCGGCGGG
GTCAGCATGG CGTCGCAGAC CGCGGCGAAC GTCGGGTTCT CCGGATCGTG GCCGGATCTG
GGGAACGTGA TCGTCGGCGC GCCGGCGATC GCTTCCGACT CCGACGGGCG GCTGATCGTG
CTCGCCTGCG AGCTGGACGG CGCGCTGCAC ATCAACCGGC AGACGGCGGC GGGGACGGGG
AGTCCGTTCG GCGGCTGGCA GCTCGTGGGG CACTGA
 
Protein sequence
MRPPVKLRAA LLAFAAALFS VPSAPARADT FAASPSIVQV VAHADDTFLF FNPDLRKVYD 
FPLVTVFLTA GAATTEVGPN QAFSSTCLYG QSRDKGARAA AAEIAGVRNP TWTRTPITFA
GKVAEEDTLD QAPQVKLVFF KLHDAGDANY VSGVNKQGIL EQIYNSGQIT GWHQATMGTL
AADGGSDCEQ QYANQTYTKS QLTASLTALY AHYNATVVYG MDPHRFDSDP GNTDHLGAGG
FTLDSVAAYH GPGSGGHVLL RPYRDYNISK EGSTLNGGDS ATKNGDFISY LGPDRGDIPG
VYHGLYDTSP DPNNSFYTPF YSRQYSRWPN GEVWTALDGT GKLNAFAILN SQVQQWIETT
PGGAWTGPTP IPNSSGLTPT LSVIRDPSGM LRVFTTRLSD YSAMTDVETA PGVWSAWKSL
GSANPDDPTL QGDPAALTEQ NGNVTVFVRN LGTGVSAKTL NPGGSWPSTW ADLGGFDVRD
DLAAGLGGSG AGELFAPSGQ GILHWKQNTA RRWAMDSSPL TPAAAGKTQV SFALNKDGRP
EIFYADPNNP SVATQWTQGN GTWTRSPGLI GGSPPMLESV AATTAPDGRI SIAIRNSGGG
VSMASQTAAN VGFSGSWPDL GNVIVGAPAI ASDSDGRLIV LACELDGALH INRQTAAGTG
SPFGGWQLVG H