Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8021 |
Symbol | |
ID | 8339399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 9312479 |
End bp | 9314494 |
Gene Length | 2016 bp |
Protein Length | 671 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644961106 |
Product | hypothetical protein |
Protein accession | YP_003118685 |
Protein GI | 256397121 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.555479 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCCTC CCGTCAAACT CCGCGCCGCC TTGCTGGCGT TCGCCGCGGC CTTGTTCAGC GTGCCGTCGG CGCCGGCCCG CGCTGACACG TTCGCCGCCT CTCCGAGCAT CGTCCAAGTC GTCGCGCACG CCGACGACAC CTTCCTCTTC TTCAATCCAG ACCTGCGCAA GGTCTACGAC TTCCCGCTGG TCACGGTGTT CCTCACGGCC GGCGCGGCGA CCACCGAGGT CGGGCCGAAC CAGGCCTTCT CCAGCACCTG CCTGTACGGC CAGAGCCGCG ACAAGGGCGC GCGGGCCGCC GCCGCCGAGA TCGCCGGCGT GCGGAACCCG ACGTGGACCC GGACCCCGAT CACCTTCGCC GGCAAGGTCG CGGAGGAGGA CACCCTCGAC CAGGCGCCGC AGGTGAAGCT GGTCTTCTTC AAGCTGCACG ACGCCGGGGA CGCCAACTAC GTCAGCGGCG TGAACAAGCA GGGCATCCTG GAGCAGATCT ACAACTCCGG CCAGATCACC GGCTGGCACC AGGCCACCAT GGGCACCCTG GCGGCCGACG GCGGCTCGGA CTGCGAGCAG CAGTACGCGA ACCAGACGTA CACGAAGTCC CAGCTGACCG CCTCGCTGAC GGCACTCTAC GCGCACTACA ACGCGACCGT CGTCTACGGC ATGGACCCGC ACCGCTTCGA CAGCGACCCG GGCAACACCG ACCACCTCGG CGCCGGCGGC TTCACCCTGG ACTCCGTCGC GGCGTACCAC GGCCCGGGCA GCGGCGGGCA CGTCCTGCTG CGGCCCTACC GCGACTACAA CATCAGCAAA GAGGGATCCA CCCTCAACGG CGGCGACAGC GCGACCAAGA ACGGCGACTT CATCAGCTAC CTCGGTCCGG ACCGCGGCGA CATCCCCGGG GTCTACCACG GCTTGTACGA CACGTCGCCG GACCCGAACA ACAGCTTCTA CACGCCCTTC TACAGCCGCC AGTACTCGCG GTGGCCGAAC GGCGAGGTGT GGACGGCGCT GGACGGGACC GGCAAGCTCA ACGCCTTCGC CATCCTCAAC AGCCAGGTCC AGCAGTGGAT CGAGACGACC CCGGGCGGCG CCTGGACCGG TCCGACGCCG ATCCCCAACA GCTCCGGACT CACCCCGACG CTCTCGGTGA TCCGCGATCC CTCGGGCATG CTGCGGGTGT TCACGACCCG GCTGTCGGAC TACTCCGCGA TGACGGACGT CGAGACCGCG CCGGGCGTCT GGAGCGCCTG GAAGTCGCTG GGCAGCGCGA ACCCCGACGA CCCGACGCTG CAAGGCGACC CGGCCGCGCT CACCGAGCAG AACGGCAACG TGACGGTGTT CGTCCGCAAC CTCGGCACCG GGGTCAGCGC CAAGACCCTG AATCCGGGCG GCAGCTGGCC CAGCACATGG GCCGACCTCG GCGGCTTCGA CGTCCGCGAC GACCTCGCGG CGGGCCTCGG CGGCAGCGGC GCCGGCGAGC TGTTCGCCCC GTCCGGACAA GGCATCCTGC ACTGGAAGCA GAACACGGCG CGCCGGTGGG CGATGGACTC CTCGCCGCTG ACCCCGGCGG CGGCCGGCAA GACCCAGGTC TCCTTCGCGC TCAACAAGGA CGGCCGGCCG GAGATCTTCT ACGCCGATCC GAACAACCCG AGCGTCGCGA CCCAGTGGAC GCAGGGCAAC GGCACCTGGA CCCGCTCGCC CGGGCTGATC GGCGGCAGCC CGCCGATGCT GGAGAGCGTC GCGGCCACGA CCGCGCCGGA CGGCCGGATC AGCATCGCGA TCCGCAACTC CGGCGGCGGG GTCAGCATGG CGTCGCAGAC CGCGGCGAAC GTCGGGTTCT CCGGATCGTG GCCGGATCTG GGGAACGTGA TCGTCGGCGC GCCGGCGATC GCTTCCGACT CCGACGGGCG GCTGATCGTG CTCGCCTGCG AGCTGGACGG CGCGCTGCAC ATCAACCGGC AGACGGCGGC GGGGACGGGG AGTCCGTTCG GCGGCTGGCA GCTCGTGGGG CACTGA
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Protein sequence | MRPPVKLRAA LLAFAAALFS VPSAPARADT FAASPSIVQV VAHADDTFLF FNPDLRKVYD FPLVTVFLTA GAATTEVGPN QAFSSTCLYG QSRDKGARAA AAEIAGVRNP TWTRTPITFA GKVAEEDTLD QAPQVKLVFF KLHDAGDANY VSGVNKQGIL EQIYNSGQIT GWHQATMGTL AADGGSDCEQ QYANQTYTKS QLTASLTALY AHYNATVVYG MDPHRFDSDP GNTDHLGAGG FTLDSVAAYH GPGSGGHVLL RPYRDYNISK EGSTLNGGDS ATKNGDFISY LGPDRGDIPG VYHGLYDTSP DPNNSFYTPF YSRQYSRWPN GEVWTALDGT GKLNAFAILN SQVQQWIETT PGGAWTGPTP IPNSSGLTPT LSVIRDPSGM LRVFTTRLSD YSAMTDVETA PGVWSAWKSL GSANPDDPTL QGDPAALTEQ NGNVTVFVRN LGTGVSAKTL NPGGSWPSTW ADLGGFDVRD DLAAGLGGSG AGELFAPSGQ GILHWKQNTA RRWAMDSSPL TPAAAGKTQV SFALNKDGRP EIFYADPNNP SVATQWTQGN GTWTRSPGLI GGSPPMLESV AATTAPDGRI SIAIRNSGGG VSMASQTAAN VGFSGSWPDL GNVIVGAPAI ASDSDGRLIV LACELDGALH INRQTAAGTG SPFGGWQLVG H
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