Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8015 |
Symbol | |
ID | 8339393 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 9305981 |
End bp | 9308494 |
Gene Length | 2514 bp |
Protein Length | 837 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644961100 |
Product | hypothetical protein |
Protein accession | YP_003118679 |
Protein GI | 256397115 |
COG category | [S] Function unknown |
COG ID | [COG4485] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGTGTCA CGCCCCCGGC CCTGCGGCCG CCGGCCCCCC GTCGTCCGAG CCGTCCGAGC CGCCCCAGCC GTCCGGCCGC CGACGCCCCG GCCGGTCCCG GCGTCCCCCG GGCGCGGCGC TGGCTGGGGC GGGTGCCGGG AGCCCCGGCG GGGCGCCCTG CGCTGCGCCC GCTGCGCTCG CTCCGTCCGC TCCACCCGCG CACCGATGCC GGGACCGCCG CGCTGGTCGC GGTGGTCGTC GCGGTGCTGG CGCAGATCCC GCTGCTGACC AACCGGTTCT TCTACCTGTG GGACGACAGC GCCGCGGAGT TCCTGCCGGT CTGGAACCGC ATCGGCACCG ATCTGCTGCA CGGGCACTGG AACCCGCTGG TGCCGGGCAT GTGGAACGGC GGCAACTTCG CCGCCGAGGC GCTGTTCGGG ATCTGGAACC CGGTCGAGCT GCTGGACGCG CTGTTCACCG CGCTGTCCGG TGACCTGCTG ATCGCCGCGA TCGTGATCAA GACCCAGTTC CTGGTGCTGC TGACGCTGGG CATCTACGCG GTCTGCCGCG AGTACCGCGC GGGCCGGGCC GCCGCGGCGG TCGTCGCGGT CGCGCTGCCG TTCTCCGGCT TCACGCTCTA CTTCGACGCC GCCTCCTGGA TCGCCGGCCT CATGGGCTTC GCCTGGACCG CGCACTTCTG GTGGTCCGCG CGCCGCTATA TGCGCGGCCG CCTGAACCCG GTGGTGCCGA TCATCTTCGG GTTGATGATC GTCACCACCG GCAACCCGTA CGGCCTGCTC GGCATGGTGG TCGTGGCGAG CGCGCTGGCG GCGGAGTCGC TGGCGGCCCG CGACCGCCGC GCGATCTGGC GGCTGGCCGG GGTCAGCGCG GTGGCGGCTT CGGCGGCCGC GCTGGTGTTC CTGCCGCTGG TGCTCAGCGC AGCGGTGACC ACCCGCTCGC CGGGCTCGGG CATCATGAAC ACCGGCTTCC TGGTCCCCGG CGTCGGCGAT CTGCTGAACC TGTCCGCGCC GGCCTACCTG CCGCACTCGG TGTCCTGGCA CATGGCGTTC TGGTCCGTGC CGGCGACGTA TCTGGCGTGG TTCATCGCCC CGCTCGCGCC GTGGCTGGAC TGGCGGCGGG TGACCCACCG GCCGCGCACG CTGATCGGCG TCGGGCTGCT CGCGGTGGTC TATCTGGCGA TGGCGGTCGG CCCGTCGCAG ATCTGGCTCT TCCGCTGGCC GCTGCGCGTC ATCGAGTACG CCTACCTGGG ACTGTGCATC GTGCTGGCGC TGGCGCTCAC CGAGGCGCCG CGCACCGACC TGCCCCGGCG CCGTGCGGCG GTGACCGCGG CGATCATCGT GGTCGGCGGC TACCTGTCGT GGTCGGCGCA GCCTGGCCGG TTCCACACCG TCATCGCCGC GACCGCCCTC GTCGGCGTCC TGTCCTGGCT GATGGTCCGC CGGGTGCGAG CCGGACGGCC GCTGTCCCGG CTGCTGATCG GCGGGACGGT CGCCGTGCTG GGCTTCCAGG CGCTGGCGTT CCCGGCCAAC CAGAACGTCA CCAACTGGCA TCCGCAGCAC GACGTGGCTT CGATGAAGCA GCACTTCGAC AAGCTCTACC AAGGCAACAC TCTGATGGTC GGCGACCCGC TGACCGAGGC CGACCGGCTC GGGCGGCGGC AGGTGTGGCA CGACCTGCCC GGCGGCAACC TGCTGCAGGT CGCGGGGGTG ACGAGCCTGA ACAACTACAC CGGCGTCTCC TACCGCGCCT ACATGCGGCA CCTGTGCATG TCGTACTACG GCGGCACATG CCAGTCGCTC TTCGCCAGGC TGTGGCACAA GGACACCGAC TCCGCCGCCG ACCTGGCCGA TCTGCTGCGG CTGCAGACCG TGGTGGTGCA GACCCGGCAG TCGGTGCTGA AGGCCCTGAA TCCGCCGCCG CCGGCCGCCG GGAAGACGCC CACGAAGCCG CTGGTGCTCC CGGCCGGCTG GACCGTGCGG GAGCTCGACG CCCACACGCT GGTGCTGAAC CGTCGCAACG CCCTGCCGTG GCCGAACGGA CGGGTCTCCT ACACGGCGCC GGGCGTCCAC GTCACGGCGG ACGACATCGC CTCGGACGGC GTCGGCGAGA CCCTGCGCTA CACGGGATCG GGCGAGGTCC GGATCGCGGC GCTGCTGTGG CCGGGGTGGC ACGCGACCGT CGACGGGCAC GCGGCGAAGC TGAAGGGGAC GGACGTCGGG ATCATTAAGG TCCTGCTGCC GCCCGCGCGC AGCGGCGGCA GCACGCTGAA GCTGAGCTTC CAGCCGCCGG GCTACCGGAT CGGGGAGGCG ATGGCGCTGC TCGGGCTGGG TCTCGCCGGG CTGATCATCG CGCTCTGGTA TCGCAGCCGG CGGCGGCTGC GGGCGGAGGT GGCGGGGACG GCCGCAATGG CGGTGCCAGT TCCGGCGCCG GCTTCGGCTT CGGTTCCGGC TCCGGTTCCC GCTAGCGAGG CAGCCGCTGA CACTTCGGAC AGAAGTAGCT CGACCGATTC ATGA
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Protein sequence | MSVTPPALRP PAPRRPSRPS RPSRPAADAP AGPGVPRARR WLGRVPGAPA GRPALRPLRS LRPLHPRTDA GTAALVAVVV AVLAQIPLLT NRFFYLWDDS AAEFLPVWNR IGTDLLHGHW NPLVPGMWNG GNFAAEALFG IWNPVELLDA LFTALSGDLL IAAIVIKTQF LVLLTLGIYA VCREYRAGRA AAAVVAVALP FSGFTLYFDA ASWIAGLMGF AWTAHFWWSA RRYMRGRLNP VVPIIFGLMI VTTGNPYGLL GMVVVASALA AESLAARDRR AIWRLAGVSA VAASAAALVF LPLVLSAAVT TRSPGSGIMN TGFLVPGVGD LLNLSAPAYL PHSVSWHMAF WSVPATYLAW FIAPLAPWLD WRRVTHRPRT LIGVGLLAVV YLAMAVGPSQ IWLFRWPLRV IEYAYLGLCI VLALALTEAP RTDLPRRRAA VTAAIIVVGG YLSWSAQPGR FHTVIAATAL VGVLSWLMVR RVRAGRPLSR LLIGGTVAVL GFQALAFPAN QNVTNWHPQH DVASMKQHFD KLYQGNTLMV GDPLTEADRL GRRQVWHDLP GGNLLQVAGV TSLNNYTGVS YRAYMRHLCM SYYGGTCQSL FARLWHKDTD SAADLADLLR LQTVVVQTRQ SVLKALNPPP PAAGKTPTKP LVLPAGWTVR ELDAHTLVLN RRNALPWPNG RVSYTAPGVH VTADDIASDG VGETLRYTGS GEVRIAALLW PGWHATVDGH AAKLKGTDVG IIKVLLPPAR SGGSTLKLSF QPPGYRIGEA MALLGLGLAG LIIALWYRSR RRLRAEVAGT AAMAVPVPAP ASASVPAPVP ASEAAADTSD RSSSTDS
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