| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7962 |
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| Symbol | |
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| ID | 8339340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 9238686 |
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| End bp | 9239783 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644961047 |
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| Product | aminotransferase class I and II |
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| Protein accession | YP_003118626 |
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| Protein GI | 256397062 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | [TIGR03539] succinyldiaminopimelate transaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGAAGC TCCCTGACTT CCCGTGGGAC CGGCTCGCGC CCGCCAAGGC GCGAGCCGGC
CAGCACCCGG ACGGAATCGT CGACCTCTCC GTCGGCACCC CAGTCGACCC GGTGCCGGCG
GTCGTGCAAG ACGCCCTACG GACCGGGTCC AACGCGCCCG GCTACCCACT GACCCACGGC
ACCCCCGCCC TGCGCGAGGC TGCCGTCGGG TGGATGGCAC GCCGGCTCGG CGTGTCCGGC
GTCGCCCCGG CAGCCGTGCT GCCGGTACTT GGCACCAAGG AGCTGGTGGC CTGGCTCCCG
ATGCTGCTCG GGCTCGGCCC GGGGGACCAG GTGGTCATCC CGGCGGTGGC CTATCCGACC
TACGACGTCG GCGCGCGCAT CGCCGGCGCC GACACGCTGG TCGCCGCGCC GGAGGACGCC
GCGGAGCTGA TCGGCGCGCG CCGCCCGAAG CTGCTCTGGC TCAACTCCCC GGCGAATCCC
AACGGGCGGG TCGCCTCGGC CGCCGAGCTG CGCGCGGTGG TCGCTGCGGC CCGCGAGGCG
GGGACCGTCG TGGTCTCCGA CGAGTGCTAC ATCGAGCTGG CCTGGGAGGC CGAGCCGGTC
TCGCTGCTGC ACCCGGACGT CTGCGGCGGC AGCCACGAGG GACTGCTCGT GGTGCACTCG
CTGTCCAAGC GCTCGAACCT GGCTGGCTAC CGCGCCGGCT TCGTCACCGG CGACCCGGCG
ATCGTGGCCG ACCTGCTGGA GGTGCGCAAG CACGCCGGCA TGATCATGCC GCAGCCGGTG
CAGGATGCGA TGGCGGCCGC CCTGAATGAC GACGCGCACG CTGCGGAGCA GAAGGAGCGC
TACCGCAAGC GGCGTGAGGT TCTGCGCGGG GCGCTGGAGC ATGCGGGCTT CCGCATCGAG
CACTCCGAGG CCGGGCTGTA CTTGTGGTCC ACGCGCGACG AGGACTGCTG GACCACGGTC
GACTGGCTCT CCGAGCGCGG CATCTTGGTG GCTCCTGGCG ACTTCTACGG CGAGGCTGGG
GCGCGGCATG TGCGGGTCGC GCTGACTGCG AGTGATGAGC GGGTCGCGGC TGCGGCTGCG
CGGTTGATCG GGTCCTGA
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| Protein sequence | MRKLPDFPWD RLAPAKARAG QHPDGIVDLS VGTPVDPVPA VVQDALRTGS NAPGYPLTHG
TPALREAAVG WMARRLGVSG VAPAAVLPVL GTKELVAWLP MLLGLGPGDQ VVIPAVAYPT
YDVGARIAGA DTLVAAPEDA AELIGARRPK LLWLNSPANP NGRVASAAEL RAVVAAAREA
GTVVVSDECY IELAWEAEPV SLLHPDVCGG SHEGLLVVHS LSKRSNLAGY RAGFVTGDPA
IVADLLEVRK HAGMIMPQPV QDAMAAALND DAHAAEQKER YRKRREVLRG ALEHAGFRIE
HSEAGLYLWS TRDEDCWTTV DWLSERGILV APGDFYGEAG ARHVRVALTA SDERVAAAAA
RLIGS
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