Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7947 |
Symbol | |
ID | 8339325 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 9219296 |
End bp | 9220075 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644961032 |
Product | hypothetical protein |
Protein accession | YP_003118611 |
Protein GI | 256397047 |
COG category | [R] General function prediction only |
COG ID | [COG1611] Predicted Rossmann fold nucleotide-binding protein |
TIGRFAM ID | [TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1 [TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCAAG GCAGCGGGAA CGGACACGGC ACCGGCAGCA GTTTCACCGA GCGCTTCGTC GGAGCGGTGA CCCGTCGGCG GGGACAGGAG CAGTTGCCGG CGGCCACGGC CGACCAGAAG CTGCTGGACC ATGCGTACGG CAAGGACTGG AAGGACGAGG ACCCCTGGCG GGTGCTGCGC ATCCAGGGCG AGTTCGTCGA GGGCTTCGAC TCCTTGGCCC GCACCGGTCC GGCCATCACC GTCTTCGGCT CGGCCCGCAC CCCGACCGGA AGCCCCGAGT ACCTGATCGG CGAGCAGATC GGCCGCGGTC TGGCGACCGC CGGCTGGTCG GTCATCACCG GCGGCGGCCC GGGCGCCATG GAGGCGGCGA ACAAGGGCGC CATCGACGCC GGCGGACGCT CCATCGGCCT GGGCATCGAG CTGCCTTTTG AGCAGTCCTT GAACAGCTAC ATCGACCAGG GCATCAACTT CCGCTACTTC TTCGTCCGCA AGACCATGTT CCTGAAGTAC TCCCAGGGCT TCGTGGTGCT GCCCGGCGGC TTCGGGACCA TGGACGAGCT CTTCGAAGCG CTGACTCTGG TCCAGACACA CAAGGTGACG TCGTTCCCGG TGGTCCTGGT CGGCCGCGGC TACTGGGGCG GGCTGGTGGA CTGGATCCGC GCGTCGATGA TCCCGGCCGG CAAGATCGCC CCGGGCGACC TGGACCTGAT CCACCTCGTC GACGACCCAG ACGAGGCGGT CGCGATCATG GGCAAGCCGG GGGAGCGTGG CCTAAGCTAG
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Protein sequence | MSQGSGNGHG TGSSFTERFV GAVTRRRGQE QLPAATADQK LLDHAYGKDW KDEDPWRVLR IQGEFVEGFD SLARTGPAIT VFGSARTPTG SPEYLIGEQI GRGLATAGWS VITGGGPGAM EAANKGAIDA GGRSIGLGIE LPFEQSLNSY IDQGINFRYF FVRKTMFLKY SQGFVVLPGG FGTMDELFEA LTLVQTHKVT SFPVVLVGRG YWGGLVDWIR ASMIPAGKIA PGDLDLIHLV DDPDEAVAIM GKPGERGLS
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