Gene Caci_7935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7935 
Symbol 
ID8339313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9209944 
End bp9210747 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content70% 
IMG OID644961020 
ProductEnoyl-CoA hydratase/isomerase 
Protein accessionYP_003118599 
Protein GI256397035 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAGT CGCGCGAATA TCCGCTCTTG GCCGTCCGCC GCACGTCGGA TGGTGTGTTG 
ACCGTGACGT TGGACGACCC GGACCGGCGC AACGCGATGA CCGCGCCGAT GACCGCGTCC
TGGGAGCGGC TCATGCGGGA GATCGCGCGG GACGAGGAAA TCCGCTGTGT CGTCGTGACC
GGAGCCGGCT CCGCCTTCTG CGCCGGCGGC GATCTCGGGT GGATCGGCGC CGAGCCGGGC
GCGCCTGTGG AAAAACTCCG CGACAAGATG CTGCCCTTCT ACCGGATCTG GCTGAGCCTG
CGGGATCTGC CGGTCCCGAC CATCGCCGCG GTCAACGGCC CGGCGGTGGG CGCCGGCGCG
TGTCTGGCTC TGGCCTGCGA TCTGCGCTAC GCGGTGGACA CCGCGACGTT CGCGGTCCCG
TTCACCAAGC TCGGCATGCA CCCGGGGATG GCCGCGACGT GGCTGCTGCC GGAGGTCGTG
GGCATGGCCA CCGCGCGTGA GCTGCTCTAC ACGAACCGTG CCGTGAGCGG CGCGGAAGCT
GTCGCGCTCG GCGTCTTCAA CAGGGTGTTC CCCGCCGGGG ACTTCCCTGG GGAGATCGAG
CGGATCGCCT CCGATGTGGC CGCCGGAGCG CCGATCGCGG TGAAGCTCAC CAAGCAGGCA
CTGATCGGTG ACGGACACGA GTCGTTCGAG GCCGCACTGC GCTGGGAGGC GCTCGCGCAG
CCGATCACGA TGGCCACCGA GGATCTTCAG GAAGGCCTCG CGGCCCAGCG CGAGCGGCGT
GTGCCGCGCT TCACCGGCGC CTGA
 
Protein sequence
MPESREYPLL AVRRTSDGVL TVTLDDPDRR NAMTAPMTAS WERLMREIAR DEEIRCVVVT 
GAGSAFCAGG DLGWIGAEPG APVEKLRDKM LPFYRIWLSL RDLPVPTIAA VNGPAVGAGA
CLALACDLRY AVDTATFAVP FTKLGMHPGM AATWLLPEVV GMATARELLY TNRAVSGAEA
VALGVFNRVF PAGDFPGEIE RIASDVAAGA PIAVKLTKQA LIGDGHESFE AALRWEALAQ
PITMATEDLQ EGLAAQRERR VPRFTGA