| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7922 |
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| Symbol | |
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| ID | 8339299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 9194135 |
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| End bp | 9195472 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644961006 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003118586 |
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| Protein GI | 256397022 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCCC CTCGGATTCC CCAAAACTTC GAACGGCCCT TCGCGCGTCG CGGGCTGCTC
AAAGGGATGG GCGCGGCGGC GGCGTTCGCC ACAGTTCCGG GCGCGCTGGC TGCTTGTTCT
TCCAGCAAGA GTTCCAGCTC CGGCAACGCC GGTTCGGCGA CGTCCCCGGT GACGTTCGGT
TCCAACTACT CCGACGCCAG TCCGAAGGCG GCGTTCGCGG CGCTGACCGC GGCGGCCACG
GCGGCCGGCG GCCCGAAGGT GACCGTCAAC ACGGTCGACC ACAATACGTT CCAGAACAAC
ATCACCAGCT ACCTGCAGGG CACCCCGGAC GACCTGTTCA CCTGGTTCGC CGGCTACCGC
ATGCAGTACT TCGCGGCGCA GGGCCTGGCC CTGCCGATCG ACGACGTCTG GGCGAAGATC
GGCGGCAACT TCAGCGCCTC GGTCAAGACG CTGTCCACCG GGTTGGACGG CCACCAGTAC
TTCGTGCCGA TCTACAACTA CCCGTGGGTG GTCTTCTACA ACAAGAGCCA CTTCGCCGAG
AAGGGCTACA CCGTCCCGAC CACCTGGGAC CAGTTCATCG CGCTGTGCCA GAAGATGAAG
GCCGACGGCA TCGTCCCGCT GGCCTTCGCC GACAAGGACG GCTGGCCCGC GCTGGGGACC
TTCGACATCC TCAACATGCG GATCAACGGG TACGACTACC ACATCAAGCT GATGAAGCAC
CAGGTCCCGT GGACCGACCC GGGCGTGACC GCGGTCTTCG ACAAGTGGGC CGAGCTGATG
CCGTACATGC AGACCGGCGC CAACGGCCGC ATCTGGCAGG ACGCGGCGAA GGCGCTGGAG
CAGAAGCAGG CCGGCATGAT GTTCCAGGGC ACCAACCAGG TCGCCGCGCA GTACGTCAGT
GACAACGCGA ACCTGGCCGA CCTGGACTTC TTCCCGTACC CGGCGATCAA CCCGACGTAC
GGCCAGAACT ACATGGACGC CCCGACCGAC GGCTTCATGA TCAGCAAGAA GGCGAAGAAC
CCGGCCGGCG CCAAGGCGAT CCTGGAGTAC ATAGGCACCG CCGCCGCCGA GGCGACGTTC
CTGAAGACCG ACCAGTGGGA CGTGGGTGTG GCCACCGGGC TGCAGGCGCC GTCCTATGAC
GCCGTGCAGA CCAAGTCGGC CGCGGCGATC GCCGGCTGCA AGGCCGTGGC GCAGTTCATG
GACCGGGACG CCGACCCGGC GATGGCCACC GCGATGATCT CGATCATCCA GAAGTTCATC
GACGACCCGA GCACCGGCAA CATCACCAGT CTGCAGAACA GCGCCGAGCA GCAGGCGAAG
GCGATCTACA CGTCATGA
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| Protein sequence | MTSPRIPQNF ERPFARRGLL KGMGAAAAFA TVPGALAACS SSKSSSSGNA GSATSPVTFG
SNYSDASPKA AFAALTAAAT AAGGPKVTVN TVDHNTFQNN ITSYLQGTPD DLFTWFAGYR
MQYFAAQGLA LPIDDVWAKI GGNFSASVKT LSTGLDGHQY FVPIYNYPWV VFYNKSHFAE
KGYTVPTTWD QFIALCQKMK ADGIVPLAFA DKDGWPALGT FDILNMRING YDYHIKLMKH
QVPWTDPGVT AVFDKWAELM PYMQTGANGR IWQDAAKALE QKQAGMMFQG TNQVAAQYVS
DNANLADLDF FPYPAINPTY GQNYMDAPTD GFMISKKAKN PAGAKAILEY IGTAAAEATF
LKTDQWDVGV ATGLQAPSYD AVQTKSAAAI AGCKAVAQFM DRDADPAMAT AMISIIQKFI
DDPSTGNITS LQNSAEQQAK AIYTS
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