Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7916 |
Symbol | |
ID | 8339293 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 9188325 |
End bp | 9189107 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644961000 |
Product | 3-hydroxybutyrate dehydrogenase |
Protein accession | YP_003118580 |
Protein GI | 256397016 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGCTG CTGTCACTTC TGTCGCCGCC CTGGACCTGT CCGGCCGCAC CGCGCTGGTC ACCGGTGCCG CCGGCGGCAT CGGGCTGGCC TGCGCCGAGC GGCTGGCCGC GGCCGGCGCC AAGGTGGTCG TCGCCGACAT CAGCGCCGAC GGCGCGCACG CCGCCGCCGA GAAGGTCGGC GGCGAGGCGC TGGTCGCCGA CCTGAGCGAC CTGGACCAGG CCTCGGCACT GCCGCACCGG ATCGGCGGGG TGGACGTGCT GGTCAACAAT GCCGGCCTGC AGCACGTCGC GCCGCTCCAC GAGTTCCCGG TCGACCGCTT CTCGCTGATC CTGCGGCTGA TGCTGGAGGC GCCGTTCCGC CTGATCCGCG AGTCGCTGCC GCACATGTAC GAGCGCGGCT GGGGGCGGGT CGTGAACATC TCCTCGGCGC ATGGGCTGCG CGCCTCGGAG TTCAAGGCCG CGTACGTGAC GGCCAAGCAC GGCCTGGAAG GGCTGTCAAA GGTCGCGGCG CTGGAGGGCG CGCCGTACGG CGTCACCTCG AACTGCGTGA ACCCGGCCTA CGTGCGCACG CCCCTGGTCG AGAACCAGAT CGCCGACCAG GCCGCCGCGC ACGGCATCCC GCCGGAGGAG GTGGTGGCGA AGGTGATGCT GGAGCGCTCG GCCGTCAAGC GCCTGATCGA GCCCGCCGAG GTGGCCGAGC TGGTGGCGTA TCTGTGCTCC CCGGCCGCCG CCTCGGTCTC CGGCGCCTCG CTGGCCATGG ACGGCGGATG GACAGCACGG TGA
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Protein sequence | MDAAVTSVAA LDLSGRTALV TGAAGGIGLA CAERLAAAGA KVVVADISAD GAHAAAEKVG GEALVADLSD LDQASALPHR IGGVDVLVNN AGLQHVAPLH EFPVDRFSLI LRLMLEAPFR LIRESLPHMY ERGWGRVVNI SSAHGLRASE FKAAYVTAKH GLEGLSKVAA LEGAPYGVTS NCVNPAYVRT PLVENQIADQ AAAHGIPPEE VVAKVMLERS AVKRLIEPAE VAELVAYLCS PAAASVSGAS LAMDGGWTAR
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