| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7876 |
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| Symbol | |
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| ID | 8339252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 9134482 |
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| End bp | 9136695 |
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| Gene Length | 2214 bp |
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| Protein Length | 737 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644960959 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_003118540 |
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| Protein GI | 256396976 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR02696] guanosine pentaphosphate synthetase I/polynucleotide phosphorylase
[TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.017282 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCGGAGG GTGTTTTCAC CACCGAGGCC GTGATCGACA ACGGCCCGTT CGGCCAGCGC
ACCGTGCGCT TCGAGACAGG CCGTCTGGCC CGTCAGGCCG CCGGCTCCGT CGTGGCCTAC
CTGGACGAGG AGACGATGGT CCTTTCGGCG ACCACCGCCT CGAAGTCCCC CAAGGACTCT
CTCGACTTCT TCCCGTTGAC GGTCGATGTC GAGGAGCGCA TGTACGCCGT GGGCCGTATC
CCCGGCTCCT TCTTCCGGCG CGAGGGCCGT CCGAGTGAGG ACGCGATCCT CACCTGCCGG
CTCATCGACC GGCCGCTGCG TCCGTCCTTC GCCAAGGGCC TGCGCAACGA GGTGCAGGTC
GTGGCCACGA TCATGGCGCT GAACCCGGAC CACCTGTACG ACGTCGTGGC GATCAACGCC
GCCTCGGCCT CCACGCAGCT GGCCGGCCTG CCCTTCTCCG GTCCCATCGG CGGCGTGCGC
GTCGCGCTGA TCCAGGACCG CTGGGTGGCC TTCCCGACCC ACACCGAGCT CGCCGACGCC
GTGTTCGACA TGGTCGTGGC CGGCCGGACG CTGGAGGACG GCGACGTCGC GATCATGATG
GTCGAGGCCG AGGCCACCAG CCAGACGGTG TCCCTGGTCG CCGGCGGTTC CACCGCCCCG
ACCGAGGAAG TCGTCGCCGA CGGCCTGGAG GCCGCCAAGC CCTTCATCAA GGCGCTGTGC
GTGGCCCAGC AGGAGCTGGC CTCGCAGGCC GCCAAGGCCA CCGCCGAGTT CCCGCGCTTC
CTGGACTACC AGGACGACGT GCTGGAGGCG GTGAGCGCCA CGGCCAAGAA CGAGCTGTCC
AACGCGCTGA CCATCGCCGG CAAGCACGAG CGCGAGGAGG AGCTGGACCG CGTCAAGGCG
CTGGTCGTGG AGAAGCTCGC GCAGCAGTTC GAGGGTCGCG AGAAGGAGAT CGGCGGGGCG
TTCCGCGCCC TGACCAAGAA GCTGGTCCGC GAGCGCATCA TCCGCGACCA GGTCCGCATC
GACGGCCGCG GCGTGCGCGA CATCCGCCCG CTGTCCGCCG AGGTCGAGGT CGTGCCCCGC
GTGCACGGCT CGGCGCTGTT CGAGCGCGGC GAGACCCAGA TCCTGGGCAT CACCACGCTG
AACATGCTCC GGATGGAGCA GCAGCTGGAC ACGCTGAACC CCGAGACGCG CAAGCGCTAC
ATGCACAACT ACAACTTCCC GCCGTACTCC ACCGGCGAGA CCGGCCGCGT GGGTTCGCCC
AAGCGCCGCG AGATCGGCCA CGGCGCCCTC GCCGAGCGCG CGCTGGTGCC GGTCCTGCCG
ACCCGCGAGG AGTTCCCCTA CGCGATCCGC CAGGTGTCCG AGGCTCTCAG CAGCAACGGC
TCCACCTCGA TGGGCTCGGT CTGCGCCTCG ACCATGTCCC TGCTGAACGC CGGTGTGCCG
CTGAAGGCCC CGGTCGCCGG TATCGCGATG GGCCTGGTCT CCGCGGAGAT CGACGGCAAG
ACCGAGTACG TCGCGCTGAC CGACATCCTC GGCGCCGAGG ACGCCTTCGG CGACATGGAC
TTCAAGGTCG CCGGCACCAA GGAGTTCGTC ACCGCGCTGC AGCTGGACAC CAAGCTGGAC
GGCATCCCGG CCTCGGTCCT GGCCGCCGCC CTGAAGCAGG CCAAGGACGC GCGTCTGCAC
ATCCTGGACG TCATGATGGA AGCCATCGAC GTCCCGGACG AGATGTCCGA GTTCGCGCCG
CGCATCATCT CGGTGAAGAT CCCGGTGGAC AAGATCGGCG AGGTCATCGG CCCGAAGGGC
AAGATGATCA ACCAGATCCA GGAGGACACC GGCGCCGAGA TCACCATCGA GGACGACGGC
ACCATCTACA TCGGCGCCTC CAACGGGGCC GCGGCCGAGG CCGCGCGCGT GACGATCAAC
CAGATCGCCA ACCCCACGAT GCCGGAGGTC GGCGAGCGCT ACCTGGGCAC CGTGGTGAAG
ACCACGACCT TCGGCGCGTT CGTCTCGCTG ATGCCGGGCC GCGACGGCCT GCTGCACGTC
TCCCAGCTCA AGAAGCTGGC CGGCGGCAAG CGGGTGGAGA ACGTCGAGGA CGTGGTGAAG
GTCGGGGACA AGCTGCAGGT GGAGATCGCC GAGATCGACT CCCGCGGCAA GCTCTCGCTG
ATCCCCGTGC TGCCCGACGA GGAGAGCAAG CCGGCCGAGG CCAAGGCGGA GTAA
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| Protein sequence | MSEGVFTTEA VIDNGPFGQR TVRFETGRLA RQAAGSVVAY LDEETMVLSA TTASKSPKDS
LDFFPLTVDV EERMYAVGRI PGSFFRREGR PSEDAILTCR LIDRPLRPSF AKGLRNEVQV
VATIMALNPD HLYDVVAINA ASASTQLAGL PFSGPIGGVR VALIQDRWVA FPTHTELADA
VFDMVVAGRT LEDGDVAIMM VEAEATSQTV SLVAGGSTAP TEEVVADGLE AAKPFIKALC
VAQQELASQA AKATAEFPRF LDYQDDVLEA VSATAKNELS NALTIAGKHE REEELDRVKA
LVVEKLAQQF EGREKEIGGA FRALTKKLVR ERIIRDQVRI DGRGVRDIRP LSAEVEVVPR
VHGSALFERG ETQILGITTL NMLRMEQQLD TLNPETRKRY MHNYNFPPYS TGETGRVGSP
KRREIGHGAL AERALVPVLP TREEFPYAIR QVSEALSSNG STSMGSVCAS TMSLLNAGVP
LKAPVAGIAM GLVSAEIDGK TEYVALTDIL GAEDAFGDMD FKVAGTKEFV TALQLDTKLD
GIPASVLAAA LKQAKDARLH ILDVMMEAID VPDEMSEFAP RIISVKIPVD KIGEVIGPKG
KMINQIQEDT GAEITIEDDG TIYIGASNGA AAEAARVTIN QIANPTMPEV GERYLGTVVK
TTTFGAFVSL MPGRDGLLHV SQLKKLAGGK RVENVEDVVK VGDKLQVEIA EIDSRGKLSL
IPVLPDEESK PAEAKAE
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