Gene Caci_7870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7870 
Symbol 
ID8339246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9129394 
End bp9130146 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content69% 
IMG OID644960953 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003118534 
Protein GI256396970 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.645188 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.180866 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCATCGG TTCGAGTCGG CGACATCGAC GTCTACTACG AGATCCACGG CGAGGGCCCG 
CCCCTGGTGT TCATCGGCGG CCTCGGTGTG GACCTGACCG TTTTCGCGCC CCTCACCGAC
CTGCTGGCGC GCAGCTTTCG CGTCCTGACT TTCGACAACC GCGGCGCGGG TCGCACGGAC
AAGCCGGACG CCCCGTATTC GATCCCGATG ATGGCTGGCG ACACGGTCGG CCTGATGGAC
GCCCTCGGCC TCCCCCGGGC GCACATGGTC GGGATCTCGA TGGGCGGACG GATCGCGATG
GAACTCGCCG CCGAACATCC CTCCCGCGTC GACCGCCTGG TCCTGATCTC CACGGCGGCG
ACCGGGACCG GCCGACTGCG GATGTCGCTG CCGGCCCGCG TTCTGGGGCT CGCGAAGCGC
CTGCACATTC TGCGCGGAGC AGGAGAGACC CAGCGGCAAC CGCACTTCGC GCACCAGCAT
CAACTGGCCG CCAGTGCCGC CTACGACGGT GCCGAACGCT TGGCTGACAT CCAGGCGCCC
ACCCTGATCC TGCATGGAAA GCGCGACCGC AGCATCAAGC CGGCTGCCGC GCTCGCCACC
CGCGTCGGCA TCCGCGACTC GGAGATCGAT TTCTTCCGCG GCGGCCACAT GTTCTCCCTG
CTGGCGCAGC GGGAGGCGGT CGTGGCGCGG ACCGAGGACT TCTTGCAGGA CTGGCGCGGG
CAGCGCTGGC CGACGAGCCT GCCGCAGATT TAG
 
Protein sequence
MPSVRVGDID VYYEIHGEGP PLVFIGGLGV DLTVFAPLTD LLARSFRVLT FDNRGAGRTD 
KPDAPYSIPM MAGDTVGLMD ALGLPRAHMV GISMGGRIAM ELAAEHPSRV DRLVLISTAA
TGTGRLRMSL PARVLGLAKR LHILRGAGET QRQPHFAHQH QLAASAAYDG AERLADIQAP
TLILHGKRDR SIKPAAALAT RVGIRDSEID FFRGGHMFSL LAQREAVVAR TEDFLQDWRG
QRWPTSLPQI