Gene Caci_7841 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7841 
Symbol 
ID8339217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9099416 
End bp9100324 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content71% 
IMG OID644960925 
ProductABC transporter related 
Protein accessionYP_003118506 
Protein GI256396942 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.134356 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAGA TCGAGAACCT GACCAAGCGC TACGGCGCCA GGTACGCCGT GCGCGACCTG 
ACGTTCAGCG TGCGTCCGGG GCGGGTGACG GGCTTTCTGG GACCGAACGG CGCCGGGAAG
TCCACGACGA TGCGCGCGGT CCTCGGCCTG GATCTCCCGA CCGCCGGCCG CGTCCTGGTC
GACGGCCGGC CCTACGCCGC GCTGGAGCGT CCGCTGACCC ACGTCGGCAT GCTGCTCGAC
ACCGGGGGAG TGCACCCCGG CCGCAGTGCG CGGCAGCATC TGCGCGCGGT GGCCGCGGCG
GGGAAGCTTT CGGAGCGGCG GGTGGACGAG GTGCTGGCCC GCGTCGGGCT GACCGACGTG
TCCCAGGACC GGGTCGGCGG CTACAGCCTC GGCATGCGGC AGCGGCTGGG GATCGCGACC
GCCCTGCTCG GCGATCCCGG GATCCTGATG TTCGACGAAC CGGTCAACGG CCTGGATCCG
GAAGGCATCC GGTGGATCAG AGACCTGATG AAAGGGCTGG CGGCCGAGGG GCGCACGGTG
TTCGTCTCCA GCCACCTGAT GAGCGAGATG GAGAGCACCG CCGACCACCT GGTGGTCATT
GGCCGCGGGC GGCTGATCGC CGACCTCCCG GCGCGCGAGT TGATCGAGCG GTACGGCGGC
GGATTTCTGA GCGTGCGCAC CGATGATCCC GGTCGGCTGA TCACAGTGCT GGCCGCCGCC
GGGGCTCAGG TGGCGCCGGA AGGTCCGGAC ACCCTGCGAG TGGTCGGGAT GGCCGGGGAC
GCCGTGGCGC GGCTGGCTTA CCAGGCCGGA GTGCTGGTGC TCGACGTGGT GCGGCGAGCG
ACGTCGTTGG AGGACGCGTA TCTGCAGCTC ACTGATGCGG CAGTCGAGTA TCGGGGGGTG
GGGGCGTGA
 
Protein sequence
MIEIENLTKR YGARYAVRDL TFSVRPGRVT GFLGPNGAGK STTMRAVLGL DLPTAGRVLV 
DGRPYAALER PLTHVGMLLD TGGVHPGRSA RQHLRAVAAA GKLSERRVDE VLARVGLTDV
SQDRVGGYSL GMRQRLGIAT ALLGDPGILM FDEPVNGLDP EGIRWIRDLM KGLAAEGRTV
FVSSHLMSEM ESTADHLVVI GRGRLIADLP ARELIERYGG GFLSVRTDDP GRLITVLAAA
GAQVAPEGPD TLRVVGMAGD AVARLAYQAG VLVLDVVRRA TSLEDAYLQL TDAAVEYRGV
GA