| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7831 |
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| Symbol | |
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| ID | 8339207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 9085410 |
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| End bp | 9086918 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644960915 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_003118496 |
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| Protein GI | 256396932 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0429863 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGCA CCGTCGACAC GAACCAGACC CTCGGCCACC CCGAGAGCTC CCCGCCCGAC
TCCGGGGGAG CCGCCGACAA GGCCACATCC AAGCTCGGCA GGGCCGTGAT CCTGGCGCTG
TTCGCCATCA TCGGCGCCGA CATCATGGAC CTGCTCGACA CCACGATCAT GAACATCGCC
AGCCCGGTCC TGCGCACCGA CCTCGGCGCC TCGACCTCGG CCCTGCAGTG GATCGTCGCC
GGCTACACGC TGGCCTTCGC GGTCATGCTG ACCACCGGCG GCCGGCTCGG CGACGTCTTC
GGCCGCAAGC GGATGTTCCA GGTCGGCATC TCAGGCTTCC TGCTCGGCTC GGTGCTGTGC
TCGGTCGCGC AGACCTCGGG CGAGCTGATC GGCGCGCGCA TCCTGCAGGG CGCCTTCGCC
GCGGTGATGA TCCCGCAGGG TCTGGGCATG CTGCGGGCGA TGGTCCCGGC GGAGAAGATG
AACTCCGTCT TCGGCATCTT CGGTCCGATG ATGGGCCTGG CCGCGACCCT CGGCCCGATC
CTGGGCGGCT GGCTGGTCGG CGCCGACCTG TTCGGGCTGA GCTGGCGCGC GATCTTCCTG
GTCAACGTCC CGGTCGGGAT CGCCGCCCTG GCGTTCGGCA GCAAGGTGCT CCCCAAGGAC
GATCACGCCG CCGACGGCGC CAAGCCCAAG CTGGACATCG TCGGCATGCT GCTGGCCACC
GCCGGCGTCA TGCTGCTGGT CTACCCGCTG GTCCAGGGCC GGGAGTCCGG CTGGCCGCTG
TGGATGTTCG CCATGATGGC CGCCTCGATC CCGACCTTCG GCGTCTTCGC CCTGCACCAG
CGCCGCCGCA ACGCCGCCGG CCGCGACCCG TTCGTGGTGC CGACCGTGTT CCGCAAGCGC
TCGTTCGTCA GCGGCATCGC GGTGCTGTTC GCCTTCTCGG CGGCGATGAG CGGCGTGTTC
TTCGTCTACA CCCTGTTCAT GCAGATCGGC CTGCACTTCA GCGCCCTGCA CGCCGGTCTG
ACCATGCTGC CCTGGTCCAT CGGCACCATC GCCTCCATGG GCGCCTCCCA GGCGCTGATG
CCCAAGGTCG GCCCGCGCCG CACCCTGCAG GCCGGCATGC TGGTGATGGC CATCGGCACG
GTGATCGCGG CGCTGCTGGT GAACTCCTAC GGCGCGACCA CCACGACCTG GACGCTCGTC
GCCCCGCTGC TGGTCTCCGG CATGGGCATG GGCCTGATCT TCGGCCCGAT CTTCGGTACC
GTCCTGGGCG ACCTGGACGA CGCCGAGGTG GGCTCGGCCT CGGGCCTGCT CAACGCGATG
CAGCAGCTGG CCGGCGCGTT CGGGATCGCC GCGCTGGGCA CGGTGTTCTT CGACAAGGCG
GGCACGCTGA TGACCAGCGT TCCGGCCGCC GCGACCCTGG TGTTCGCGAT CAGCGCCGCC
ATCCTGGTGG TCGCCTGGGC CGCCGCCTTC AGCATGTCGA AGCACACGCA GGAGGCTGAG
GGGCACTAA
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| Protein sequence | MTSTVDTNQT LGHPESSPPD SGGAADKATS KLGRAVILAL FAIIGADIMD LLDTTIMNIA
SPVLRTDLGA STSALQWIVA GYTLAFAVML TTGGRLGDVF GRKRMFQVGI SGFLLGSVLC
SVAQTSGELI GARILQGAFA AVMIPQGLGM LRAMVPAEKM NSVFGIFGPM MGLAATLGPI
LGGWLVGADL FGLSWRAIFL VNVPVGIAAL AFGSKVLPKD DHAADGAKPK LDIVGMLLAT
AGVMLLVYPL VQGRESGWPL WMFAMMAASI PTFGVFALHQ RRRNAAGRDP FVVPTVFRKR
SFVSGIAVLF AFSAAMSGVF FVYTLFMQIG LHFSALHAGL TMLPWSIGTI ASMGASQALM
PKVGPRRTLQ AGMLVMAIGT VIAALLVNSY GATTTTWTLV APLLVSGMGM GLIFGPIFGT
VLGDLDDAEV GSASGLLNAM QQLAGAFGIA ALGTVFFDKA GTLMTSVPAA ATLVFAISAA
ILVVAWAAAF SMSKHTQEAE GH
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