| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7784 |
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| Symbol | |
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| ID | 8339160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 9026655 |
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| End bp | 9028253 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644960868 |
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| Product | putative alpha-isopropylmalate/homocitrate synthase family transferase |
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| Protein accession | YP_003118449 |
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| Protein GI | 256396885 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00977] 2-isopropylmalate synthase/homocitrate synthase family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.227522 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCGA AAGACGTCTA CGAGTCTTTT CACATCTACG ACACCACCCT GCGCGACGGC
AGCCAGCAGG AGGGCCTGTC CCTCGCTGTC GCCGACAAGC TCGCGATCGC CCGGCACCTG
GACGCCCTGG GCGTCGGCTT CATCGAGGGC GGCTGGCCGG GCGCCGTCCC GAAAGACACA
GAGTTCTTCC GGCGGGCTCA AACAGAGCTC GACCTGAAGC ACGCGCAGCT CGCCGCGTTC
GGCAAAACCC GCCGGACCGG CGTGAAGGCC GCCGACGACC CGCTGGTGGC CGCGCTGCGG
GAGTCCGGGG CGCCGATCGT CACGCTGGTG GCCAAAAGCC ATGTCCGGCA TGTCGACCTG
GCGCTCCGGA CCACCTTGGA GGAGAACCTG GCGATGATCC GGGACACCGT GGAGCACCTG
CACGCCGAGG GCCGCCGGGT GTTCCTGGAC GCCGAGCACT TCTTCGACGG CTACCTGGCC
GACCCCGCCT ACGCCCTGGA GTGCCTGCGC ACCGCCGCCG AGGCCGGCGC CGACGTGGCC
GTGCTCTGCG ACACCAACGG CGGCATGCTG CCCACGCAGC TCGCGGACAT CGTGCACGAG
GTGCGCGAGG CGAGCGGCAC CCGGATCGGC ATCCACACCC ACGACGACGC CGCCTGCGCG
GTGGCCAACG CGCTGGCCGC GGTCGACGCC GGCGCCACCC ACGTGCAGGG CACGGCCAAC
GGCTACGGCG AGCGCTCGGG CAACGCGAAC CTGTTCAGCG TGGTCGCCAA CCTGCAGCTC
AAGCTGGGCC GGGAGGTGAT CCCGCCGGCC GGGCTGGCCG AGATGACCCG GATCGCGCAC
GCCGTCGCCG AGGTCACCAA CCTCGCGCCG AACCCGCAGG CGCCCTACGT CGGGGTCTCG
GCCTTCGCGC ACAAGGCCGG GCTGCACGCC TCGGCGGTCC GTGTCGACCC GGACCTGTAC
CAGCACATCG ACCCGCAGCT GGTCGGCAAC GACATGCGGA TGCTGGTCTC GGAGATGGCC
GGCCGGGCCT CGATCGAGCT CAAGGGCCGG GAGCTGGGCT TCGACCTGTC CGCCGACCCC
GACACGCTGG CCCGGGTGAC CAACCGGGTC AAGGAGCTGG AGGCCCAGGG CTACTCCTTC
GAGGCCGCCG ACGCCAGCTT CGAGCTGCTG CTGCGCGGCG AGCTCGGCGG CGCGCCGGTG
CGCTTCTTCG AGGTGCTGTC CTGGCGGACC TTCGCCGACC GGCTGGCCGA CGGCCTGGTG
GTCAACCAGG CGACGGTGAA GCTGCGGGTC AAGGGCGAGG AGGTGCTCGC CGCCGGCGAG
GGCAACGGCC CGGTCAACGC GCTGGACAAC GCGCTGCGCG CCGCGCTGGC CGCCGCCTAT
CCGGCGCTGG CGGGGCTGGA GCTGATGGAC TACAAGGTCC GGATCCTCAC CGGCGACCAC
GGCACCGCCT CGCGGACCAG GGTGCTGATC ACCACCTCCG ACGGCGTGGC GGAATGGTCC
ACGGTCGGCG TGGACGAGAA TGTCATCACC GCGTCCTGGC AGGCACTGGT CGACGCCGTG
ACCTTCGGGC TCCTTGCCAA GGGTGAGACA GTGGTCTGA
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| Protein sequence | MSAKDVYESF HIYDTTLRDG SQQEGLSLAV ADKLAIARHL DALGVGFIEG GWPGAVPKDT
EFFRRAQTEL DLKHAQLAAF GKTRRTGVKA ADDPLVAALR ESGAPIVTLV AKSHVRHVDL
ALRTTLEENL AMIRDTVEHL HAEGRRVFLD AEHFFDGYLA DPAYALECLR TAAEAGADVA
VLCDTNGGML PTQLADIVHE VREASGTRIG IHTHDDAACA VANALAAVDA GATHVQGTAN
GYGERSGNAN LFSVVANLQL KLGREVIPPA GLAEMTRIAH AVAEVTNLAP NPQAPYVGVS
AFAHKAGLHA SAVRVDPDLY QHIDPQLVGN DMRMLVSEMA GRASIELKGR ELGFDLSADP
DTLARVTNRV KELEAQGYSF EAADASFELL LRGELGGAPV RFFEVLSWRT FADRLADGLV
VNQATVKLRV KGEEVLAAGE GNGPVNALDN ALRAALAAAY PALAGLELMD YKVRILTGDH
GTASRTRVLI TTSDGVAEWS TVGVDENVIT ASWQALVDAV TFGLLAKGET VV
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