Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7749 |
Symbol | |
ID | 8339125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 8986204 |
End bp | 8987178 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644960833 |
Product | NusA antitermination factor |
Protein accession | YP_003118414 |
Protein GI | 256396850 |
COG category | [K] Transcription |
COG ID | [COG0195] Transcription elongation factor |
TIGRFAM ID | [TIGR01953] transcription termination factor NusA |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACATCC CCACGAGTGC ATTGCGCGAC CTGGAGAAGG ACCGCGGGAT CCCCTTCGAG AAGCTGGTCG AGGACATCGA GGCGGCGCTG CTGATCGCCT ACAAGCGCAC CGACGGCGCG AAGACCCGGG CCCGGGTCCA GGTCGACCGG AGCAGCGGCC ACGTCACCGT CTGGGCCGTG GAGGACATCG AGGACGGCAG CACCCGGGAG TACGACGACA CCCCGAGCGA GTTCGGCCGT ATCGCCTCCA CCACCGCCAA GCAAGTGATC CTGCAGCGGC TGCGGGACCA CGAGGACGAG CAGACCTTCG GGGAGTTCTC CGGCCGCAAG GGCGACCTGA TCACCGGCGT GGTGCAGCAG GGCCGCGACC CGCGCGCGGT GCTGGTGAAC ATCGGCAAGA TCGAGGGCAC GCTCCCGGCC GCCGAGCAGG TCCCCGGCGA GGAGTACCGG CACGGCGAGC GCCTGAAGTG CTACGTCGTT GACGTCCGGC GCGGCCAGCG CGGTCCCCAG GTGACCCTCT CGCGCACCCA CCCGGACCTG GTGCGCAAGC TCTTCGCGCT GGAGGTCCCG GAGATCGCCG AGGGCGCGGT GGAGATCACC GCGATCGCCC GCGAGGCCGG CCACCGCACC AAGATCGCGG TCCGCTCGCA CCGCGCCGGC GTCAACGCCA AGGGCGCCTG CATCGGCCCG ATGGGCGCGC GGGTCCGCAA CGTGATGGCC GAACTGCACG GCGAGAAGAT CGACATCGTC GACTGGTCCG AGGACCCGGC CGAGATGGTC GGCAACGCGC TGTCCCCGGC GCGCGTGTCG AAGGTCCAGG TCGTGGACCT GGACCAGCGC AGCGCCCGGG TCATCGTCCC GGACTTCCAG CTGTCGCTGG CCATCGGCAA GGAAGGCCAG AACGCGCGGC TGGCCGCGCG GCTGACCGGC TGGCGTATCG ACATCCGCTC GGACGCGGAG CCGATCTCGG AGTAG
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Protein sequence | MDIPTSALRD LEKDRGIPFE KLVEDIEAAL LIAYKRTDGA KTRARVQVDR SSGHVTVWAV EDIEDGSTRE YDDTPSEFGR IASTTAKQVI LQRLRDHEDE QTFGEFSGRK GDLITGVVQQ GRDPRAVLVN IGKIEGTLPA AEQVPGEEYR HGERLKCYVV DVRRGQRGPQ VTLSRTHPDL VRKLFALEVP EIAEGAVEIT AIAREAGHRT KIAVRSHRAG VNAKGACIGP MGARVRNVMA ELHGEKIDIV DWSEDPAEMV GNALSPARVS KVQVVDLDQR SARVIVPDFQ LSLAIGKEGQ NARLAARLTG WRIDIRSDAE PISE
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