Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7737 |
Symbol | |
ID | 8339113 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 8975348 |
End bp | 8976115 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644960821 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003118402 |
Protein GI | 256396838 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02947] RNA polymerase sigma-70 factor, TIGR02947 family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTTGG CACTGAAGCA TCGGCGTCCG GCAGTCAAGA TCGATTTGTC GGGGGTCGAG CCTTGGATAA GCTCTTCGGG AAAGCCCGAG GAGGTGAGGA CGGTCGCCGT GACCGCTGAC GACGCACGTG GCGAGGCCGT CATCGCCGAG GCTGTGTCCA CCGACGCCCC GCGCGTGGAT CCCGGGGAGT CCGAGGACGC GCGCAACGAG CGCTTCGAGC GCGACGCCCT CGTCTACCTG GACCAGCTCT ACCCGGCCGC GCTGCGGATG ACCCGCAACC CGGCCGACGC CGAGGACCTG ATCCAGGAGA CCTTCGCCAA GGCGTTCGCC TCCTTCCACC AGTTCCGCGA GGGCACCAAC CTCAAGGCCT GGCTGTACCG GATCCTCACC AACACGTTCA TCAACAGCTA CCGCAAGAAG CAGCGCGAGC CCCAGGTCAG CCCGACCGAG GAGATCGAGG ACTGGCAGCT GGCCCGGGCC GAGTCGCACA GCTCGGCGGG TCTGCCCTCG GCCGAGACGG TGGCGCTGGA CCACCTGCCG GACTCCGACG TCAAGGAAGC CCTGCAGGCC ATCGGCGAGG AGTTCCGCAT CGCGGTCTAC CTGGCCGACG TCGAAGGCTT CGCCTACAAG GAGATCGCCG ACATCATGGG CACGCCCATC GGCACCGTGA TGTCCCGGTT GCACCGCGGG CGCCGGCAAC TCCGTGCGAT GCTTGAGGAC TACGCGCGGG AGCGCGGCCT GGTGGCCGCC GCGTCGGAAG GGAACTGA
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Protein sequence | MTLALKHRRP AVKIDLSGVE PWISSSGKPE EVRTVAVTAD DARGEAVIAE AVSTDAPRVD PGESEDARNE RFERDALVYL DQLYPAALRM TRNPADAEDL IQETFAKAFA SFHQFREGTN LKAWLYRILT NTFINSYRKK QREPQVSPTE EIEDWQLARA ESHSSAGLPS AETVALDHLP DSDVKEALQA IGEEFRIAVY LADVEGFAYK EIADIMGTPI GTVMSRLHRG RRQLRAMLED YARERGLVAA ASEGN
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