Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7716 |
Symbol | |
ID | 8339092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 8953517 |
End bp | 8954035 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644960800 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003118381 |
Protein GI | 256396817 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02983] RNA polymerase sigma-70 factor, sigma-E family |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGACAG CGAGATCGGA GGCGGACTTC GAGGCGTTCT ACAGCGCCTC GTCGCGCCGC CTGCTCGGCC ACGTGTACGC GATGGTCGGC GATGTGGCCG AGGCCGAGGA CGCGCTCCAG GAGGCCTATG CGCGGGCCTG GCAGCGGTGG GGCCGGGTCG CAGGCTACGA GGACCCTGAA GCCTGGGTCC GCACCGTCGC CTACCGCATC GCGGTCAGCT CCTGGCGCCG GACGGCCAAC CGGCTGCGCG CGCACCGGCG CGGCGCCCGG GCCGAGGAGG AGCCGGGCGC CTCGCCGGAC CGGCTGGCGC TGATCGCCGC GCTGCGCGCG ATCCCCGCCG AGCAGCGGCG GGTGATCGTG CTGCACCACC TGGTGGGGCT GAGCGTCGAG GAGGTCGCCC AAGAGACCGG CGCCCCGATC GGGACGGTCA AGTCGCGCCT GGCCCGGGGC CGCCGCGCGC TCGCCGGCCA CGTCTCCGAG TTCGCCGATG AGAATCAGGA GGCCGAGAAC TATGTCTGA
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Protein sequence | MGTARSEADF EAFYSASSRR LLGHVYAMVG DVAEAEDALQ EAYARAWQRW GRVAGYEDPE AWVRTVAYRI AVSSWRRTAN RLRAHRRGAR AEEEPGASPD RLALIAALRA IPAEQRRVIV LHHLVGLSVE EVAQETGAPI GTVKSRLARG RRALAGHVSE FADENQEAEN YV
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