| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7683 |
|---|
| Symbol | |
|---|
| ID | 8339059 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 8916284 |
|---|
| End bp | 8916895 |
|---|
| Gene Length | 612 bp |
|---|
| Protein Length | 203 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644960767 |
|---|
| Product | NADH-quinone oxidoreductase, chain I |
|---|
| Protein accession | YP_003118348 |
|---|
| Protein GI | 256396784 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) |
|---|
| TIGRFAM ID | [TIGR01971] NADH-quinone oxidoreductase, chain I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGACC AGCAGAACCC TTACTCCGGT AAGGAGAAGC CGAAGAACCC GCTGGCCGGG
GTCGCGGGGT TCGGCGTCAC CTTCTCGACG ATGTTCAAGA AGCGGACGAC CGAGCAGTAC
CCCGAGGAGC CCAAGCAGAC CGCGCTGCGG TTCCACGGCC GGCACCAGCT CAACCGGCAC
CCCGACGGGC TCGAGAAGTG CGTCGGCTGC GAGCTGTGCG CCTGGGCCTG TCCGGCGGAC
GCCATCTACG TGGAGGGCGC GGACAACACC GAGGAGGAGC GCTACTCCCC CGGGGAGCGC
TACGGCCGCG TCTACCAGAT CAACTACCTG CGCTGCATCC TGTGCGGGCT GTGCATCGAG
GCGTGCCCGA CCCGGGCGCT GACCATGACC AACGAGTTCG AGCTCGCGGA CAGCTCGCGG
GCCAGCCTCA TCTACACCAA GGACGAGCTG CTCGCCGGGC TCACCGAGGG CATGGTGGAG
TCCCCGCACT CGATCTTCCC GGGCATGACC GCCCAGGACT ACTACGAGGG CAAGGTCACC
GCGGCCGCGC CGGGCACCGT CCCGCAGCAG CGCGGCTCGG CCAAGCCCGA CTCGGACGGG
GAGGACGCGT GA
|
|---|
| Protein sequence | MSDQQNPYSG KEKPKNPLAG VAGFGVTFST MFKKRTTEQY PEEPKQTALR FHGRHQLNRH
PDGLEKCVGC ELCAWACPAD AIYVEGADNT EEERYSPGER YGRVYQINYL RCILCGLCIE
ACPTRALTMT NEFELADSSR ASLIYTKDEL LAGLTEGMVE SPHSIFPGMT AQDYYEGKVT
AAAPGTVPQQ RGSAKPDSDG EDA
|
|---|
| |