Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7583 |
Symbol | |
ID | 8338955 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 8790557 |
End bp | 8792350 |
Gene Length | 1794 bp |
Protein Length | 597 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644960663 |
Product | protein of unknown function DUF470 |
Protein accession | YP_003118248 |
Protein GI | 256396684 |
COG category | [S] Function unknown |
COG ID | [COG2898] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.389483 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGACA GGGATGGAAG CGAGAACCCG GTCCCGGAGC ATCGGCTGAC GGTCTGGCCG TTCGCCGCCC TGGTCCTGGC CGCGGCGGCG ACGCTGTTCG GGTACGCCGC AGCCTCCGCG CCGCCGTCCT GGCTCACCAG GACGGTCATC GTGATCACCG GCACGTCGCC CTCCGGCGGC CACGCGGTGC ACCTCGGCCT CACGTTCCTG CTGCTCGGGC GCGGTTTGTA CATGCGGCGT CTGATGGCGC TGTATCTGAC CTCCGCCGCT GTCGCGTGGA CGACGGCGAT GTCGCTGATC ACCTGGGACC AGCCGTGGCG GCTGCTGCCG ATGGCGGCTT TCGCGTGGGC GCTGTGGGGC GCGCGGATGC GGTTCACCGC GGTGCCCGAC GCGGCGCGGG TGCGTACGGC CCTGCACATG CTGCTCGGGT TCGGCATCGT CGCGCTCGTG GTCGGCGGCG GCGGGATCTT CCTGCAGCGG GACCGTCTCA GCTCCTCGCT GACGCCGGTC GGGCTCGGGC GCGAGCTGCT CGACGGGCTG ACGGGAAACT CCGAGCCGAT GACGATCGAG GGGCGGTCGT GGTTTCTCCA CGGGCTGTCG CTGCTCGGCG GGGTCATGCT GCTGCTGGTG CTGACGTGCC TGTTGGCGCC GGCGCGGGCG CCGCTCCCGG GGACGGACAC CGAGCGGGAC CGGGTGCGCC GATTAGTGCA GCATCCTGAC TCCGACACGC TGGCTCCGTT CGCGCTGCGT CATGACAAGT CTTATGTGTT CTCCCCCGAC GGCCGCGCCG CGATCGGGTA TCGGGTGTTC CTGGGGACCG CCGTGGTCGG CGGCGACCCG CTCGGCGCGG CGGACGCGCG GGAGGCGGCG GTCGTCGAGT TCCTGGCTTT GTGCCGACGC CAGGGCTGGC GGCCGACAGT TCTCGGCGCG CGCGAAGAGC TGATGCCGCT GTGGAAGGCG CACGGGATCC GGCGCGGGAT CGAGATCGGC GACGAGGTCA TGCTGGACGT CGCCGGGTTC TCGCTGGAGG GGCGGTCGAT CCGCAACGTG CGGCAGGCGG TGCGGCGTAC GCACAAGACC GGGATCACCA CGCGCGTCTT ACGCGAGACG GCGCTGGACG AGGAGGAAGC CGACCAGCTG CTCGGCATCC ACCAGCGCTG GCTGAAGGGA CACGCCGAGC ACGGCTTCGC GATGAACCTG GACGCCATCA CCTCGGCGCG GCACCCCGAC GCGCTGCTGA TCGTGGCGTA CGCCGCCGAC GGCCGCGCGG TCGGCTTCCA GCGCTACCAC CCGGTCGGCG GCGACCAGGC CTCCGGCCAC CCCACGGCGC TGTCGCTGGA CGTCATGCCG CGCGACCCGC AGAGCCCGAA CGGAGTGAAC GAGCGCCTGA TCGTCGACCT GATCGCCTGG GCCCACGACC GCGGCATCGG CGAGATCTCC CTGAACTTCG CAGCCTTCCG CCCCATCATG GACGCCGGCG CCGAGCGCAC GCTGTTCCAG AGCGCGGCGT ACCGCGCGAT CCACCTCCTG GACCCATGGA TCATGCTGGA GAGCCTGTAC CGCTTCAACG CCAAGTTCCG CCCCGGCTGG CAGCCCCGAT CGGTGATGTT CCGCTCCTGG GGCGAGGTCG GATGGCTCGC GGCATCAGCC CTCGCGATGG AGTTCTCCCT GCCACTGGAT CGGCGACGGG TCGCCCCCGC CGGCGAGCGG GCACACGGCG AAGCCGGGAT CGCCGATCGC GGAGTCGGAG ACGAAGGCAC CGTGGGCGGC GCGGTACGGC GGCGGGGCTG GTAG
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Protein sequence | MADRDGSENP VPEHRLTVWP FAALVLAAAA TLFGYAAASA PPSWLTRTVI VITGTSPSGG HAVHLGLTFL LLGRGLYMRR LMALYLTSAA VAWTTAMSLI TWDQPWRLLP MAAFAWALWG ARMRFTAVPD AARVRTALHM LLGFGIVALV VGGGGIFLQR DRLSSSLTPV GLGRELLDGL TGNSEPMTIE GRSWFLHGLS LLGGVMLLLV LTCLLAPARA PLPGTDTERD RVRRLVQHPD SDTLAPFALR HDKSYVFSPD GRAAIGYRVF LGTAVVGGDP LGAADAREAA VVEFLALCRR QGWRPTVLGA REELMPLWKA HGIRRGIEIG DEVMLDVAGF SLEGRSIRNV RQAVRRTHKT GITTRVLRET ALDEEEADQL LGIHQRWLKG HAEHGFAMNL DAITSARHPD ALLIVAYAAD GRAVGFQRYH PVGGDQASGH PTALSLDVMP RDPQSPNGVN ERLIVDLIAW AHDRGIGEIS LNFAAFRPIM DAGAERTLFQ SAAYRAIHLL DPWIMLESLY RFNAKFRPGW QPRSVMFRSW GEVGWLAASA LAMEFSLPLD RRRVAPAGER AHGEAGIADR GVGDEGTVGG AVRRRGW
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