Gene Caci_7563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7563 
Symbol 
ID8338934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8762514 
End bp8763683 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content75% 
IMG OID644960643 
Producthistidine kinase 
Protein accessionYP_003118229 
Protein GI256396665 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.939415 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTCCC GCGTCTCGCT GCGCGTCGGC ACGGTCGGCG CCCGGTCCCG CAAGGTCGGC 
GGGACCGTGA TCGGCCGCGC CCGCGAGGTG CGGCCGCTGG ACCGCTTCCA CAGCATCAAG
GTCAAGCTCG GCGTGCTGGT CGTGGCCTCG GTGTCGGTGG TCGGGATCTT CACCGCGATC
GGGGTCTCGG CCGGGATCCA GGCGCGGTAC GTGGTCAGCG TGGCGGTCAT CCTGTCGCTG
GGCGTCACGC AGATCCTGGC GCACGGCATG ACCAGCCCGC TGCGCTCCAT GGCCGACGCC
GTCGAGAGCA TCGCGCGCGG CGACTACAGC CGGCGCGTCA CCACCGCGAC CTCCCGCGAC
GAGGTCGGAC AGCTGGCCGC GGCGTTCAAC CTGATGGCCG CCGACCTCGA GGCGGTCGAC
CGGCAGCGCA AAGAGCTGAT CGCGAACGTC TCGCACGAGT TGCGGACGCC GATCTCGGCG
CTGCGCGCGG TGCTGGAGAA CGTCGTGGAC GGCGTCACCG AGCCCGATCC GCCGACCATG
CGGCTGGCGC TGGAGCAGGC CGAGCGGCTC GGCCGGCTGG TCAGCACGCT GCTGGACCTG
TCCCGGATCG ACGCCGGCGC GGTCGAGCTG GACCGGGAGG ACGTGGCGCT GGAGGAGTTC
CTGGGGACCG TGGCGCGCGA GGCCACGGTC TCGATGCTGA CCCGGGACGG CGCCGGGCGG
CGCCCCTACA CCGTGGTCGA CGTGGTCCCG CCGGCGCTGA CCGTGCGCGC CGACCGCGAG
CGCCTGCACC AGGTCGCGGC GAACCTGCTG GACAACGCGG TGCGCCACTC CCCGCCCGGC
GGCAAGGTCA CGCTGCGCGC TCGGCGGCTG GAGGAGGGCG GCGTCCGCGT CGAGGTCTGC
GACCAGGGTC CGGGCATCCC GCCCGGCGAG CGGGTCCGGG TGTTCGACCG GTTCGACCGC
GGCTCGCGGC AGGCCGCGGA CGGCGGCACC GGGCTCGGAC TGGCGATCGC GCGCTGGGTG
GTGGATCTGC ACGGCGGCCG GATCTCGGTC GCCGAGCCGG TCGTGCCGGC GCTCGCCCCG
GGCGCCGCGG AGCCCGTCGC GGCCGCTGCC GGCCGCCCGG TGGCCCTCAG CGCGTCACCC
GGCTGTGTCA TCCGCGTCGA TCTGCCGTAA
 
Protein sequence
MNSRVSLRVG TVGARSRKVG GTVIGRAREV RPLDRFHSIK VKLGVLVVAS VSVVGIFTAI 
GVSAGIQARY VVSVAVILSL GVTQILAHGM TSPLRSMADA VESIARGDYS RRVTTATSRD
EVGQLAAAFN LMAADLEAVD RQRKELIANV SHELRTPISA LRAVLENVVD GVTEPDPPTM
RLALEQAERL GRLVSTLLDL SRIDAGAVEL DREDVALEEF LGTVAREATV SMLTRDGAGR
RPYTVVDVVP PALTVRADRE RLHQVAANLL DNAVRHSPPG GKVTLRARRL EEGGVRVEVC
DQGPGIPPGE RVRVFDRFDR GSRQAADGGT GLGLAIARWV VDLHGGRISV AEPVVPALAP
GAAEPVAAAA GRPVALSASP GCVIRVDLP