Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7563 |
Symbol | |
ID | 8338934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 8762514 |
End bp | 8763683 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644960643 |
Product | histidine kinase |
Protein accession | YP_003118229 |
Protein GI | 256396665 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5002] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.939415 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTCCC GCGTCTCGCT GCGCGTCGGC ACGGTCGGCG CCCGGTCCCG CAAGGTCGGC GGGACCGTGA TCGGCCGCGC CCGCGAGGTG CGGCCGCTGG ACCGCTTCCA CAGCATCAAG GTCAAGCTCG GCGTGCTGGT CGTGGCCTCG GTGTCGGTGG TCGGGATCTT CACCGCGATC GGGGTCTCGG CCGGGATCCA GGCGCGGTAC GTGGTCAGCG TGGCGGTCAT CCTGTCGCTG GGCGTCACGC AGATCCTGGC GCACGGCATG ACCAGCCCGC TGCGCTCCAT GGCCGACGCC GTCGAGAGCA TCGCGCGCGG CGACTACAGC CGGCGCGTCA CCACCGCGAC CTCCCGCGAC GAGGTCGGAC AGCTGGCCGC GGCGTTCAAC CTGATGGCCG CCGACCTCGA GGCGGTCGAC CGGCAGCGCA AAGAGCTGAT CGCGAACGTC TCGCACGAGT TGCGGACGCC GATCTCGGCG CTGCGCGCGG TGCTGGAGAA CGTCGTGGAC GGCGTCACCG AGCCCGATCC GCCGACCATG CGGCTGGCGC TGGAGCAGGC CGAGCGGCTC GGCCGGCTGG TCAGCACGCT GCTGGACCTG TCCCGGATCG ACGCCGGCGC GGTCGAGCTG GACCGGGAGG ACGTGGCGCT GGAGGAGTTC CTGGGGACCG TGGCGCGCGA GGCCACGGTC TCGATGCTGA CCCGGGACGG CGCCGGGCGG CGCCCCTACA CCGTGGTCGA CGTGGTCCCG CCGGCGCTGA CCGTGCGCGC CGACCGCGAG CGCCTGCACC AGGTCGCGGC GAACCTGCTG GACAACGCGG TGCGCCACTC CCCGCCCGGC GGCAAGGTCA CGCTGCGCGC TCGGCGGCTG GAGGAGGGCG GCGTCCGCGT CGAGGTCTGC GACCAGGGTC CGGGCATCCC GCCCGGCGAG CGGGTCCGGG TGTTCGACCG GTTCGACCGC GGCTCGCGGC AGGCCGCGGA CGGCGGCACC GGGCTCGGAC TGGCGATCGC GCGCTGGGTG GTGGATCTGC ACGGCGGCCG GATCTCGGTC GCCGAGCCGG TCGTGCCGGC GCTCGCCCCG GGCGCCGCGG AGCCCGTCGC GGCCGCTGCC GGCCGCCCGG TGGCCCTCAG CGCGTCACCC GGCTGTGTCA TCCGCGTCGA TCTGCCGTAA
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Protein sequence | MNSRVSLRVG TVGARSRKVG GTVIGRAREV RPLDRFHSIK VKLGVLVVAS VSVVGIFTAI GVSAGIQARY VVSVAVILSL GVTQILAHGM TSPLRSMADA VESIARGDYS RRVTTATSRD EVGQLAAAFN LMAADLEAVD RQRKELIANV SHELRTPISA LRAVLENVVD GVTEPDPPTM RLALEQAERL GRLVSTLLDL SRIDAGAVEL DREDVALEEF LGTVAREATV SMLTRDGAGR RPYTVVDVVP PALTVRADRE RLHQVAANLL DNAVRHSPPG GKVTLRARRL EEGGVRVEVC DQGPGIPPGE RVRVFDRFDR GSRQAADGGT GLGLAIARWV VDLHGGRISV AEPVVPALAP GAAEPVAAAA GRPVALSASP GCVIRVDLP
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