Gene Caci_7496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7496 
Symbol 
ID8338866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8688472 
End bp8690547 
Gene Length2076 bp 
Protein Length691 aa 
Translation table11 
GC content68% 
IMG OID644960575 
Productglycoside hydrolase family 8 
Protein accessionYP_003118162 
Protein GI256396598 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3405] Endoglucanase Y 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCGCC GCTCCCAGCG CGTTCTCAGT CTGGCGACCG GAATCAGTAC CCTGGCAGGA 
TGCGTGGCAC TCGCTGTCGC GCACACCTCC GCGGTGCAAG CCGCCGGCCC GAACTACGCC
TTCCCCCAGC ACCAGACCTA CAAGGTCGGC GTCATGCCGT CGGCCTCCCA GGCCACGCGC
GACGCCGCCG TGGAGAAGCA GTACGACTCG TGGAAGGCCT CGTACCTCGT CCACGGCTGT
GCCAGCAACG AGTACTACGT GTCCACCAAG GGCGACGGTG ACGCCACCAA CAACGGCCCG
GTCTCCGAGG GCCAGGGCTA CGGCATGAAC ATCGTGCCGC TGATGGCCGG GTACGACGCC
AACGCGCAGG CCGAGTTCAA CGGTCTGTGG CAGCTGGTCA AGGACCACGA AGACCAGTAC
GGCATGATGC AGTGGCAGCT GGACGGCAAG ACCTGCAAGT ACTACAGCGG GGGCACGCCG
GACGGCGCCA CCGACGGCGA CCTGGACATC GGCTACGGCC TGATCCTCGC CGACAAGCAG
TGGGGCGGCT ACAGCAGCGA CGCCAAGACG TGGCTGAGCA ACTTCTACGC CCACAACGTG
GCGCCCGACG GCCACCTCAA GTGCGAGGAC GACGGCCCGA ACACCGACAC CCGGCCCTCG
GACCACATGA TCGACCACCT CCGGGCGTTC GCGGCGTACG ACCCCTCGCA CGACTGGAAC
AAGGTCATCA CTCGGACCGA GGCGGTCGAC AGCTCGCTGG TGACCAACTA CTCCGCCGCC
AACGGCCTGC TGCCCGACTT CGTCGTCGGC GCCAACGGCA CGCCGAAGCC GGCTCCGGCG
AACTACCAGG AGAACCAGCC GGACAACATC GTCGGCTACA ACTCGATCCG CGTGCCCTGG
CACATGGGGA CGGACGCGCT GCTCAACGGC GCCACCACCG CGGCGTTCGA GCTGAGCGAC
GCGCAGAAGT GGTCGGCGTG CGCCAAGAAG GTCTCCGGCG GCAAGCCGGG CAACGTCTAC
CCGCACCTGA ACCTGAACTG CACCGGGCAG AACACCTCGG ACGTCGCCGA GGAAGCCGGG
GACTCCATCG GCCCGTCCGC GATGGCCGCG GGCGACCAGG CGTGGACCGA CACGATCTGG
AGCTTCCTGC AGACCAACCC CTACGGTGAC GGCTACTACG GCGAGTCCAT CAAGACGCTG
GTCATGATTG TGATGGCCGG CGACTACTGG AGCCCGGCTT CGGCCTCGAC CCCGCCGCCG
CCCGCCAACG ACTTCTCGAT CTCGGCGTCC CCGGCGTCCG GTTCGGTGAG TCAGGGTTCT
TCGGCGACGG TGTCGGTCGG CACGGCTGTC ACGGCCGGAT CGGCGGAGTC CGTGGCGCTG
TCGGCGTCCG GTCTGCCGAC CGGCGCGACG GCCGGCTTCA GCCCGGCTTC GGTGAACTCC
GGAGCCTCCT CGACGCTGAC CGTCGCGACA TCGTCGTCGA CCCCGGCGGG GACGTACGCG
ATCACAGTGA CCGGGACGGC GTCCTCGGGC TCGCACTCGG CCACGTACTC GCTGACGGTC
ACCACCGTCG GCGGCGGAGG CGGCTGCACT CCGGCGCAAC TGCTGGTGAA CCCCGGCTTC
GAGTCCGGCG CGGCGACCTG GACCCAGACC TCCACCCTCG GGTTCACGCC GATCACCAAG
GCGACCTCGG CCGAGCCGGC GCACGCCGGT TCGTACGTCG CGTGGTTCAA CGGCAACGGC
AGCAAGGACA CCGACACGAT CGCGCAGAGC GTGACGATCC CGTCCGGCTG CTCGGCGTCG
CTGACCTACT GGCTGCACAT CGACACTACG GAGAAGACGA CGACGGCGAA GCCGGACACG
TTCACCGTGC AGGTGCTGAA CTCCTCGGGC ACCGTGCTGG CGACCGTGGG TTCGTTCTCC
AACCTGAACG CGGCTTCGGG CTACTCGCAG AAGACGGCCG ACCTGTCGGC CTACGCGGGC
CAGACCGTCA CGCTGAAGTT CACCGGCAGC GAGACCGACA CCAGTGGCGG GACGACCAAC
TCAGTGATCG ACGACACCTC GCTGACGACG TCCTGA
 
Protein sequence
MKRRSQRVLS LATGISTLAG CVALAVAHTS AVQAAGPNYA FPQHQTYKVG VMPSASQATR 
DAAVEKQYDS WKASYLVHGC ASNEYYVSTK GDGDATNNGP VSEGQGYGMN IVPLMAGYDA
NAQAEFNGLW QLVKDHEDQY GMMQWQLDGK TCKYYSGGTP DGATDGDLDI GYGLILADKQ
WGGYSSDAKT WLSNFYAHNV APDGHLKCED DGPNTDTRPS DHMIDHLRAF AAYDPSHDWN
KVITRTEAVD SSLVTNYSAA NGLLPDFVVG ANGTPKPAPA NYQENQPDNI VGYNSIRVPW
HMGTDALLNG ATTAAFELSD AQKWSACAKK VSGGKPGNVY PHLNLNCTGQ NTSDVAEEAG
DSIGPSAMAA GDQAWTDTIW SFLQTNPYGD GYYGESIKTL VMIVMAGDYW SPASASTPPP
PANDFSISAS PASGSVSQGS SATVSVGTAV TAGSAESVAL SASGLPTGAT AGFSPASVNS
GASSTLTVAT SSSTPAGTYA ITVTGTASSG SHSATYSLTV TTVGGGGGCT PAQLLVNPGF
ESGAATWTQT STLGFTPITK ATSAEPAHAG SYVAWFNGNG SKDTDTIAQS VTIPSGCSAS
LTYWLHIDTT EKTTTAKPDT FTVQVLNSSG TVLATVGSFS NLNAASGYSQ KTADLSAYAG
QTVTLKFTGS ETDTSGGTTN SVIDDTSLTT S