| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7483 |
|---|
| Symbol | |
|---|
| ID | 8338853 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 8677911 |
|---|
| End bp | 8679548 |
|---|
| Gene Length | 1638 bp |
|---|
| Protein Length | 545 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644960562 |
|---|
| Product | phosphoesterase |
|---|
| Protein accession | YP_003118149 |
|---|
| Protein GI | 256396585 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3511] Phospholipase C |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCAGA GCAAGAAACG ACTGATCCGC CGGAAATGGG TCCTGCCCGT TGCCGCCGCC
GCGGTGCTCG GTCTTGTCGC CACCCCGAGC GCCTTCGCGT CCGGCTACGG CTGGCACCAC
GGCCACGACG GCAGCGGTGA CGACCGCACC AGCACCCCCA TCAAGCACGT GGTCGTGCTG
TTCGACGAGA ACGTCTCCTA CGACCACTAC TTCGGCACCT ACCCGAAGGC CGCCAACGAC
GGCCAGGGCA CGACGTTCAC CGCGAAGCGG GACACGCCGA AGGCCAACGG CCTGAGCCAG
TCGCTGCTGA CGGCGAACCC GAACCAGTAC AACCCGCAGC GGCTCGCCCC GAGCCAGGCG
CTGACCTGCG ACCAGAACCA CGGCTACACG GCCGAGCAGA AGGCGACCGA CGGCGGCAAG
AACGACCTGT ACGTCCAGAA CACCAACGTG TCGACCTGCA CCGGCATGCC GGTCCTGTAC
GGCGCGCCCG GCCTGGTCAT GGACTACTAC GACGGCAACA CCGTCACCGG CCTGTGGAAC
TACGCTCAGA ACTACGCGAT GAGCGACAAC TCCTACAGCG ACGTGTTCGG CCCGTCGACC
CCCGGCGCGC TGAACCTGAT CTCCGGCCAG ACCTACGGCG CCACCGCGGT GAACTCCACC
ACCGGCCAGC CGGTCTCGGC CTCGTTCATC GGCTCGCCGA ACGCCTCCGG GGTCGGGACG
CTGTACACCG ACGCCGACCC GGCGTACGAC GACTGCTCCG ACAACGGCCA CGCCTCGACC
TCGCCGCTGG CGGCCCTGTC CGGCGCGAAC GTCGGCGACC TGCTGAACAA GAAGAACGTG
ACCTGGGGCT GGTTCCAGGG CGGCTTCGCG CCGACCACCA CCGCCACCGC GTCGGCCAAC
GGCTACGCGC AGTGCGGCGC CACGCACACC AACGTCGGCG GCAACTCCTC GGCCGACTAC
TCGCCGCACC ACGACCCGTT CGAGTACTAC AAGTCCACGG CGAACCCGCA CCACCTGCCG
CCGACGAAGA CCTCGATGAT CGGCAAGAGC GACCAGGCGA ACCACCAGTA CGACCTGACG
GCCTTCACCA CCGCGCTGAA CACCGGCAAC CTGCCGGCCG TCAGCTTCCT GAAGGCGGCG
GAGTACCAGG ACGGCCACGC CGGCTACTCC GACCCGCTGG ACGAGCAGAA CTTCCTCGCC
ACCGAGATCA ACGCGATCCA GAAGTCGCCG AACTGGAAGG ACACGGCGAT CATCGTCGCC
TACGACGACT CCGACGGCTG GTACGACCAC CAGTCCGGCA CCGTCGTCAG CGGCTCGAAC
ACCGCACTCG ACAGCTCCCC GGCCTGCACC GCGGCCGCCC CGGCCAAGGG CCAGGCGGAC
CGCTGCGGCG TCGGCCCGCG CCAGCCGTTC CTGGTGATCT CGCCGTTCAG CAAGCAGAAC
TACATCAGCC ACAACCAGAT CTCCCAGGCC TCGGTCCTGC AGTTCGTCGA GGGCAACTGG
AACCTGGGCG ACGTCGGCAA CGGTTCGTTC GACCGCACCG CCGGGTCCAT CAAGAACATG
TTCAACTTCT ATGACCGCGA TGTCTCGAAC CGCGTCATCC TGAACCCGAC CACCGGCGCG
ATCGTCTCGC ACCGGTAG
|
|---|
| Protein sequence | MSQSKKRLIR RKWVLPVAAA AVLGLVATPS AFASGYGWHH GHDGSGDDRT STPIKHVVVL
FDENVSYDHY FGTYPKAAND GQGTTFTAKR DTPKANGLSQ SLLTANPNQY NPQRLAPSQA
LTCDQNHGYT AEQKATDGGK NDLYVQNTNV STCTGMPVLY GAPGLVMDYY DGNTVTGLWN
YAQNYAMSDN SYSDVFGPST PGALNLISGQ TYGATAVNST TGQPVSASFI GSPNASGVGT
LYTDADPAYD DCSDNGHAST SPLAALSGAN VGDLLNKKNV TWGWFQGGFA PTTTATASAN
GYAQCGATHT NVGGNSSADY SPHHDPFEYY KSTANPHHLP PTKTSMIGKS DQANHQYDLT
AFTTALNTGN LPAVSFLKAA EYQDGHAGYS DPLDEQNFLA TEINAIQKSP NWKDTAIIVA
YDDSDGWYDH QSGTVVSGSN TALDSSPACT AAAPAKGQAD RCGVGPRQPF LVISPFSKQN
YISHNQISQA SVLQFVEGNW NLGDVGNGSF DRTAGSIKNM FNFYDRDVSN RVILNPTTGA
IVSHR
|
|---|
| |