| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7455 |
|---|
| Symbol | |
|---|
| ID | 8338825 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 8643010 |
|---|
| End bp | 8643768 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644960534 |
|---|
| Product | fatty acid hydroxylase |
|---|
| Protein accession | YP_003118121 |
|---|
| Protein GI | 256396557 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.084393 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.419875 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCTG TCGCCGACAA CGCTGACAAC AATCGCAACG CCTCGAACCG CACCGTCTCG
AACCGCACCG TCTCGAACCG CACCGCCGTC ACCCGCACCG CCTTCACCCG CTCCGGCATG
ACGCTGCGCG AAGCGGCGTC GCTGTTCGCC CGGCATCCAA ACTCCCGCGC GCTGGCGGCC
ACCACCGCGA CCGCCGCTGC CACGCGCCTC GTCCTCGGCA AGTGGAGCAG GCGCGATGCC
GTGGCCGCCG CCGCGATCCT GGCGACGGAA CCGTTCGTGG AGTGGATGAT CCACGTCCAT
GTCCTGCACC GCCGTCCGCG CGAGAAGAAG GACGGTGCCG TCGCCGACAG CCTGCTGGCC
AGCTCGCACC GCGCCCACCA CAGCGACCCG CGCGACCCCG ACCTCGTCTT CATCCCGCGC
CCGGCGGTGG CGCCGTCGAT CGCCGTGCTC GCGCTGGCCA ACCTCGCCGG AGCCAGGGCT
CTGCGACCGG CGCTCACCGG CTTCGCCACC GCGATCGCCT CGATGACCAC CTATGAGTGG
ACGCACTTCC TCATCCACTC CGCCTACCGC CCGCAGTCCT CGCTCTACAA GACGATCCGC
CGGACGCACC AGTTCCACCA CTTCCGCAAC GAGAACTACT GGTTCGGGAT CATCACGCCG
GTCTCCGACA AGGTGCTGAA CACCTATCCC GACAAGGACG ACGTCGCCGT GTCGAGTACG
GCCAAGGCCT TGGACGCGCG CGACCGCATC AGATCATGA
|
|---|
| Protein sequence | MTAVADNADN NRNASNRTVS NRTVSNRTAV TRTAFTRSGM TLREAASLFA RHPNSRALAA
TTATAAATRL VLGKWSRRDA VAAAAILATE PFVEWMIHVH VLHRRPREKK DGAVADSLLA
SSHRAHHSDP RDPDLVFIPR PAVAPSIAVL ALANLAGARA LRPALTGFAT AIASMTTYEW
THFLIHSAYR PQSSLYKTIR RTHQFHHFRN ENYWFGIITP VSDKVLNTYP DKDDVAVSST
AKALDARDRI RS
|
|---|
| |