Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7415 |
Symbol | |
ID | 8338785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 8596550 |
End bp | 8597236 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644960495 |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_003118082 |
Protein GI | 256396518 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.933403 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGACC GGCCCATCCG CGTGCTCGTC TGCGACGACC AGGAACTCGT GCGTACCGGC TACGCCACGA TCTTCTCAGC ACAACCCGAC ATGGAGGTCG TCGGCGAATC CGCCAACGGC CTCGAGGCGG TCGAGACGGC GACCCGCATC CGCCCCGACG TGGTGGTGAT GGACATCCGC ATGCCCCTGC TGGACGGCAT TCAAGCCACC CGCCGCCTGG CCGGACCCGA CGTCGCCGAC CCGCCGAAGG TCCTCGTCGT CACCACCTTC AACGTCGACG CCTACGTCTA CGACGCCTTC CGCGCCGGAG CCAGCGGCTT CCTGCTCAAG GACGCGCCCC CGGCCGAAAT GGTCAACGGC GTCCGCACCG TCGCCCGGGG CGAGTCCCTG CTGGCGCCGG CGGTGACGCG CACCCTCATC GGCCGCTTTG CCGAACGGCT CCGCCCGGGC GACCCTGCAC GCGCCGCGCG TGAAGCCGTC ACGCGCACAC TCACGCCTCG CGAACTGGAA GTCTTCGAGC TCATCGCCGA AGGACTCTCG AACGCCGAGA TCGCGGCCTC CCTGTTCATC ACGCCCGAGA CCGTCAAGAC CTACGTGTCA CGCATCCTGA CCAAGCTCGA CTTGCGCGAC CGGGTCCAGG CAGTCGTCCT CGCCTACCGG ATCGGACTCG CCGGCGGCAG CCTCTGA
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Protein sequence | MTDRPIRVLV CDDQELVRTG YATIFSAQPD MEVVGESANG LEAVETATRI RPDVVVMDIR MPLLDGIQAT RRLAGPDVAD PPKVLVVTTF NVDAYVYDAF RAGASGFLLK DAPPAEMVNG VRTVARGESL LAPAVTRTLI GRFAERLRPG DPARAAREAV TRTLTPRELE VFELIAEGLS NAEIAASLFI TPETVKTYVS RILTKLDLRD RVQAVVLAYR IGLAGGSL
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