Gene Caci_7415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7415 
Symbol 
ID8338785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8596550 
End bp8597236 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content69% 
IMG OID644960495 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_003118082 
Protein GI256396518 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.933403 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGACC GGCCCATCCG CGTGCTCGTC TGCGACGACC AGGAACTCGT GCGTACCGGC 
TACGCCACGA TCTTCTCAGC ACAACCCGAC ATGGAGGTCG TCGGCGAATC CGCCAACGGC
CTCGAGGCGG TCGAGACGGC GACCCGCATC CGCCCCGACG TGGTGGTGAT GGACATCCGC
ATGCCCCTGC TGGACGGCAT TCAAGCCACC CGCCGCCTGG CCGGACCCGA CGTCGCCGAC
CCGCCGAAGG TCCTCGTCGT CACCACCTTC AACGTCGACG CCTACGTCTA CGACGCCTTC
CGCGCCGGAG CCAGCGGCTT CCTGCTCAAG GACGCGCCCC CGGCCGAAAT GGTCAACGGC
GTCCGCACCG TCGCCCGGGG CGAGTCCCTG CTGGCGCCGG CGGTGACGCG CACCCTCATC
GGCCGCTTTG CCGAACGGCT CCGCCCGGGC GACCCTGCAC GCGCCGCGCG TGAAGCCGTC
ACGCGCACAC TCACGCCTCG CGAACTGGAA GTCTTCGAGC TCATCGCCGA AGGACTCTCG
AACGCCGAGA TCGCGGCCTC CCTGTTCATC ACGCCCGAGA CCGTCAAGAC CTACGTGTCA
CGCATCCTGA CCAAGCTCGA CTTGCGCGAC CGGGTCCAGG CAGTCGTCCT CGCCTACCGG
ATCGGACTCG CCGGCGGCAG CCTCTGA
 
Protein sequence
MTDRPIRVLV CDDQELVRTG YATIFSAQPD MEVVGESANG LEAVETATRI RPDVVVMDIR 
MPLLDGIQAT RRLAGPDVAD PPKVLVVTTF NVDAYVYDAF RAGASGFLLK DAPPAEMVNG
VRTVARGESL LAPAVTRTLI GRFAERLRPG DPARAAREAV TRTLTPRELE VFELIAEGLS
NAEIAASLFI TPETVKTYVS RILTKLDLRD RVQAVVLAYR IGLAGGSL