| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7374 |
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| Symbol | |
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| ID | 8338744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 8558952 |
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| End bp | 8560682 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644960455 |
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| Product | thiamine pyrophosphate protein domain protein TPP-binding |
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| Protein accession | YP_003118042 |
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| Protein GI | 256396478 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.693349 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTACTG TCGCGGACGT GCTGTGGAAG ATGCTCGCCG ACGCCGGGGT GCGGCGGTGC
TACGGCATCG TCGGCGATGC TCTGAACCCG GCGATCGATG CGCTGCGGCG AGCCGGCGAC
ATCGAGTTCG TGCATGTCCG GCACGAGGAG TGGGGCGTGT TCGCGGCGGT CGCGGAGGCG
AAGATGTCGG GGCGGCCGGT AGCGGTGTGC GGAACCGCCG GACCCGGTGT GAGCCACCTG
ATCAACGGAC TGCTCGACGC CCGCAAGGAG GGCGCCCCGG TGATCGCGAT CGCCGGCGAC
GTCGAGACCG CCATCATGGA CACAGACGGT CTGGAAGAGC TGAACCCTTA TACGTTCTTC
AGCGTGGCGT CTCTCTATAC AGGGCGCCTA GTAGACCCCC AGCAGCTGCG TCCGATCGTT
ACCTCCGCGA TCACCACCGC TCTGACCGAA CTGGGTCCGA CCGTCATCTC GCTGCCCGGC
GATGTGGCGG CAGCGGACGC GCCAGACGTT CCGACGCATA TCGCGCTGCC GAGCACGACT
ACCGGTCCCG CGCCCGACAA GGACATCGCG CAGTTGGCGG ACATCATCAA CGCCGCCAAG
ACGGTCGCCA TCTTCGGCGG CGAAGGCTGT CAGAACGCGC GGGAACAGGT CCGTGCCCTC
TCAGACATAC TGAACGCGCC CGTCGGCTAC AGCTTCAAGG GCAAGCAGTG GCTGGAGTAC
GACAACCCGC ACGCGGTCGG CATGACCGGG CTGCTCGGCT ATGGCGGCTG CTGGGAAGCG
GTGAACCACG CCGACGTACT CCTGATGCTG GGTACGGACT TCCCCTTCCC GCAGTTCCTC
CCGCACAGCG GAGTGAAGGT GGTCCAGGTG GACCGCGACG GACGCCGCCT AGGCCGCCGC
GTCCCACTGG AGCACGGACT GGTCGGCGAT GTCGGCGCCA CCCTGGACCG ACTCCTCCCG
CAACTGTCGC CGAAGACGGA CGACGCCTTC CTGCGTAAGT GCTTGAAGAA GACCGAGGAG
TTCGACAAGC AGCTGCAGCA CTACGTCGAG CGCGGCCCGG CGCTTAAGCA GATCCGCCCC
GAGTACCTGA CCGCCACTTT GGACCGGCTC GCCCCCGAAG AAGCGGTCTT CACCGTAGAC
ACCGGCACAG CGTGCATCTG GGCTGCGCAC TATCTGCACC TCGGCCCTAA GCGCCACCTG
TTCGGCAGCC TCACATGGGC CTCGATGGCC AGCGCCTCCC CGAACGCGTT CGGCGCCAAG
ATGGCCTTCC CGGACCGCGC GGCGATCGCG CTGTGCGGCG ACGGCGGCTT CACGATGCTA
GGCCTCGGCG ACCTCCTCAC GGAGGTGCAG CACAAGGCCG AGATCGTCCA CGTGATCCTG
AACAACGGCA AGCTCGACTT CGTCTGGATC GAGATGCAGG AGGCCGGGCT CCAGCCGTGG
GGCGTCGACT TCCAGAACCC CGACTTCGCC AAGGTCGGCG AGGCGCTCGG TGCCAAGGGC
ATCCGGATCG AGCGCCCCGC GGACCTGGAA CAGGGACTCA AAGAAGCGTT GAACCACCGT
GGCGGTCCCG TAGTGGTCGA CGTAGTAGTC GATCCCTATG CGTTGGCGCT ACCCGCACAC
ACTCCGGCGG CCACCGTTAA GGGATTCACG CTCAGCGTCG CTAAGCAGGC GCTGAGCGGA
CACCTCGGAG ACGTCGTCAA GGAAGCGACG CACAACGCGC GCCTACTCTG A
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| Protein sequence | MPTVADVLWK MLADAGVRRC YGIVGDALNP AIDALRRAGD IEFVHVRHEE WGVFAAVAEA
KMSGRPVAVC GTAGPGVSHL INGLLDARKE GAPVIAIAGD VETAIMDTDG LEELNPYTFF
SVASLYTGRL VDPQQLRPIV TSAITTALTE LGPTVISLPG DVAAADAPDV PTHIALPSTT
TGPAPDKDIA QLADIINAAK TVAIFGGEGC QNAREQVRAL SDILNAPVGY SFKGKQWLEY
DNPHAVGMTG LLGYGGCWEA VNHADVLLML GTDFPFPQFL PHSGVKVVQV DRDGRRLGRR
VPLEHGLVGD VGATLDRLLP QLSPKTDDAF LRKCLKKTEE FDKQLQHYVE RGPALKQIRP
EYLTATLDRL APEEAVFTVD TGTACIWAAH YLHLGPKRHL FGSLTWASMA SASPNAFGAK
MAFPDRAAIA LCGDGGFTML GLGDLLTEVQ HKAEIVHVIL NNGKLDFVWI EMQEAGLQPW
GVDFQNPDFA KVGEALGAKG IRIERPADLE QGLKEALNHR GGPVVVDVVV DPYALALPAH
TPAATVKGFT LSVAKQALSG HLGDVVKEAT HNARLL
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